Difference between revisions of "TSS:Hg 104548.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=1936 |entrez_id=1326 |gc_percent=0.393035 |gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |gene_description=mitogen-activated...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |COT= | ||
| + | |EST= | ||
| + | |ESTF= | ||
| + | |MEKK8= | ||
| + | |TPL2= | ||
| + | |Tpl-2= | ||
| + | |all_trans=AB209539:-364 | ||
| + | |c-COT= | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-364 | ||
|distance_to_tss=1936 | |distance_to_tss=1936 | ||
| + | |end=30436579 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
|gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT | |gene_alias=AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT | ||
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
| − | |gene_name=MAP3K8 | + | |gene_id=1326 |
| + | |gene_name=mitogen-activated protein kinase kinase kinase 8 | ||
| + | |gene_source=HGNC:6860 | ||
| + | |gene_symbol=MAP3K8 | ||
| + | |gene_synonyms=EST MEKK8 Tpl-2 c-COT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6860 | ||
|nearest_ensembl=ENSG00000107968 | |nearest_ensembl=ENSG00000107968 | ||
|nearest_promoter_id=NM_001320961 | |nearest_promoter_id=NM_001320961 | ||
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=30436563 | ||
| + | |strand=+ | ||
|tata_box="-4(GGGTTTAAAAAC,-,0.00)" | |tata_box="-4(GGGTTTAAAAAC,-,0.00)" | ||
| + | |transcript_name=AB209539 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104548.1 | |tss_id=hg_104548.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q59FC1 | ||
}} | }} | ||
Revision as of 20:57, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB209539 |
|---|---|
| Distance: | -364 |
| Num_trans: | 1 |
| All_trans: | AB209539:-364 |
TATA-Box annotation
| Distance to TSS: | 1936 |
|---|---|
| Nearest PromoterID: | NM_001320961 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2 |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-4(GGGTTTAAAAAC,-,0.00)" |
