Difference between revisions of "TSS:Hg 104601.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-79 |entrez_id=6935 |gc_percent=0.587065 |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |gene_description=z...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BZP= | ||
| + | |DELTAEF1= | ||
| + | |FECD6= | ||
| + | |NIL2A= | ||
| + | |PPCD3= | ||
| + | |TCF8= | ||
| + | |ZFHEP= | ||
| + | |ZFHX1A= | ||
| + | |all_trans=ENST00000488625.6:70 uc057soh.1:70 BX647794:70 ENST00000560196.5:358 uc057soi.1:358 AK309331:358 ENST00000542879.5:393 uc057soj.1:393 AK294775:393 ENST00000561304.5:412 uc057sok.1:412 AK311372:412 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=70 | ||
|distance_to_tss=-79 | |distance_to_tss=-79 | ||
| + | |end=31318425 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | |gene_alias=AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A | ||
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
| − | |gene_name=ZEB1 | + | |gene_id=6935 |
| + | |gene_name=zinc finger E-box binding homeobox 1 | ||
| + | |gene_source=HGNC:11642 | ||
| + | |gene_symbol=ZEB1 | ||
| + | |gene_synonyms=AREB6 BZP FECD6 NIL-2-A ZEB Zfhep Zfhx1a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
|nearest_promoter_id=NM_001323643 | |nearest_promoter_id=NM_001323643 | ||
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=31318406 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000488625.6 uc057soh.1 BX647794 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104601.1 | |tss_id=hg_104601.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:59, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000488625.6 uc057soh.1 BX647794 |
|---|---|
| Distance: | 70 |
| Num_trans: | 12 |
| All_trans: | ENST00000488625.6:70 uc057soh.1:70 BX647794:70 ENST00000560196.5:358 uc057soi.1:358 AK309331:358 ENST00000542879.5:393 uc057soj.1:393 AK294775:393 ENST00000561304.5:412 uc057sok.1:412 AK311372:412 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_001323643 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6 |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
