Difference between revisions of "TSS:Hg 104640.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-301 |entrez_id=3688 |gc_percent=0.651741 |gene_alias=CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB |gene_description=integrin subun...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FNRB= | ||
| + | |GPIIA= | ||
| + | |MDF2= | ||
| + | |MSK12= | ||
| + | |VLA-BETA= | ||
| + | |VLAB= | ||
| + | |all_trans=ENST00000450890.5:160 uc057sqw.1:160 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=160 | ||
|distance_to_tss=-301 | |distance_to_tss=-301 | ||
| + | |end=32958685 | ||
|entrez_id=3688 | |entrez_id=3688 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB | |gene_alias=CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB | ||
|gene_description=integrin subunit beta 1 | |gene_description=integrin subunit beta 1 | ||
| − | |gene_name= | + | |gene_id=101929475 |
| + | |gene_name=uncharacterized LOC101929475 | ||
| + | |gene_source=EntrezGene:101929475 | ||
| + | |gene_symbol=LOC101929475 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000150093 | |nearest_ensembl=ENSG00000150093 | ||
|nearest_promoter_id=NM_002211 | |nearest_promoter_id=NM_002211 | ||
|nearest_refseq=NM_002211 | |nearest_refseq=NM_002211 | ||
|nearest_unigene=Hs.643813 | |nearest_unigene=Hs.643813 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=32958646 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000450890.5 uc057sqw.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104640.1 | |tss_id=hg_104640.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:01, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000450890.5 uc057sqw.1 |
|---|---|
| Distance: | 160 |
| Num_trans: | 2 |
| All_trans: | ENST00000450890.5:160 uc057sqw.1:160 |
TATA-Box annotation
| Distance to TSS: | -301 |
|---|---|
| Nearest PromoterID: | NM_002211 |
| Entrez ID: | 3688 |
| Nearest Unigene: | Hs.643813 |
| Nearest Refseq: | NM_002211 |
| Nearest Ensembl: | ENSG00000150093 |
| Gene Name: | uncharacterized LOC101929475 |
| Gene Alias: | CD29 |
| Gene Description: | integrin subunit beta 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
