Difference between revisions of "TSS:Hg 104673.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-156 |entrez_id=1390 |gc_percent=0.79602 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000489321.5:118 uc057ssp.1:118 ENST00000354759.7:-134 uc001iya.4:-134 D14825:-134 ENST00000496019.5:-140 uc057sso.1:-140 ENST00000427847.6:151 ENST00000374728.7:151 NM_183060:151 NM_181571:151 uc057ssq.1:151 uc001iyc.4:151 ENST00000345491.7:154 uc001iyb.4:154 BC041810:154 ENST00000487132.5:171 uc057ssr.1:171 ENST00000460270.5:-179 uc001ixz.4:-179 ENST00000469949.6:-194 uc057ssn.1:-194 ENST00000429130.7:-205 uc057ssm.1:-205 ENST00000495960.5:-233 uc057ssl.1:-233 ENST00000482633.5:-248 uc057ssk.1:-248 ENST00000466251.5:-307 uc057ssj.1:-307 BC017117:-319 ENST00000490460.5:-337 uc057ssi.1:-337 ENST00000461968.5:-348 uc057ssh.1:-348 ENST00000374726.7:-373 uc001ixx.4:-373 BC066342:-373 ENST00000489388.5:-390 uc057ssg.1:-390 ENST00000482646.5:-423 uc057ssf.1:-423 ENST00000496626.5:-455 NM_001267563:-455 NM_001267562:-455 NM_001881:-455 NM_183013:-455 NR_051975:-455 NR_051974:-455 NR_051973:-455 uc057sse.1:-455 ENST00000374721.7:-486 uc057ssd.1:-486 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=118 | ||
|distance_to_tss=-156 | |distance_to_tss=-156 | ||
| + | |end=35127306 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_183060 | |nearest_promoter_id=NM_183060 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=53 | ||
| + | |species=human | ||
| + | |start=35127295 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000489321.5 uc057ssp.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104673.1 | |tss_id=hg_104673.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000489321.5 uc057ssp.1 |
|---|---|
| Distance: | 118 |
| Num_trans: | 53 |
| All_trans: | ENST00000489321.5:118 uc057ssp.1:118 ENST00000354759.7:-134 uc001iya.4:-134 D14825:-134 ENST00000496019.5:-140 uc057sso.1:-140 ENST00000427847.6:151 ENST00000374728.7:151 NM_183060:151 NM_181571:151 uc057ssq.1:151 uc001iyc.4:151 ENST00000345491.7:154 uc001iyb.4:154 BC041810:154 ENST00000487132.5:171 uc057ssr.1:171 ENST00000460270.5:-179 uc001ixz.4:-179 ENST00000469949.6:-194 uc057ssn.1:-194 ENST00000429130.7:-205 uc057ssm.1:-205 ENST00000495960.5:-233 uc057ssl.1:-233 ENST00000482633.5:-248 uc057ssk.1:-248 ENST00000466251.5:-307 uc057ssj.1:-307 BC017117:-319 ENST00000490460.5:-337 uc057ssi.1:-337 ENST00000461968.5:-348 uc057ssh.1:-348 ENST00000374726.7:-373 uc001ixx.4:-373 BC066342:-373 ENST00000489388.5:-390 uc057ssg.1:-390 ENST00000482646.5:-423 uc057ssf.1:-423 ENST00000496626.5:-455 NM_001267563:-455 NM_001267562:-455 NM_001881:-455 NM_183013:-455 NR_051975:-455 NR_051974:-455 NR_051973:-455 uc057sse.1:-455 ENST00000374721.7:-486 uc057ssd.1:-486 |
TATA-Box annotation
| Distance to TSS: | -156 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
