Difference between revisions of "TSS:Hg 104682.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=23 |entrez_id=1390 |gc_percent=0.427861 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000474931.5:0 ENST00000468236.5:0 ENST00000344351.5:0 NM_001267570:0 NM_182724:0 NM_182723:0 NM_182721:0 NR_051972:0 NR_051971:0 uc001iyr.4:0 uc031pud.2:0 uc001iyt.4:0 AK289379:0 AK291566:0 ENST00000488741.5:-12 uc001iyp.4:-12 ENST00000490511.1:35 uc001iyq.4:35 ENST00000469517.1:425 uc057ste.1:425 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=23 | |distance_to_tss=23 | ||
| + | |end=35195974 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NR_051972 | |nearest_promoter_id=NR_051972 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=35195876 | ||
| + | |strand=+ | ||
|tata_box="38(CCTTTTAGACTG,+,0.00)" | |tata_box="38(CCTTTTAGACTG,+,0.00)" | ||
| + | |transcript_name=ENST00000474931.5 ENST00000468236.5 ENST00000344351.5 NM_001267570 NM_182724 NM_182723 NM_182721 NR_051972 NR_051971 uc001iyr.4 uc031pud.2 uc001iyt.4 AK289379 AK291566 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104682.1 | |tss_id=hg_104682.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PAR2 Q03060 | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000474931.5 ENST00000468236.5 ENST00000344351.5 NM_001267570 NM_182724 NM_182723 NM_182721 NR_051972 NR_051971 uc001iyr.4 uc031pud.2 uc001iyt.4 AK289379 AK291566 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000474931.5:0 ENST00000468236.5:0 ENST00000344351.5:0 NM_001267570:0 NM_182724:0 NM_182723:0 NM_182721:0 NR_051972:0 NR_051971:0 uc001iyr.4:0 uc031pud.2:0 uc001iyt.4:0 AK289379:0 AK291566:0 ENST00000488741.5:-12 uc001iyp.4:-12 ENST00000490511.1:35 uc001iyq.4:35 ENST00000469517.1:425 uc057ste.1:425 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NR_051972 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "38(CCTTTTAGACTG,+,0.00)" |
