Difference between revisions of "TSS:Hg 104685.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=-398 |entrez_id=219771 |gc_percent=0.835821 |gene_alias=C10orf9|CBCP1|CCNX|CFP1 |gene_description=cyclin Y |gene_name=CCNY |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CBCP1= | ||
| + | |CCNX= | ||
| + | |CFP1= | ||
| + | |all_trans=AK314666:43 ENST00000374704.7:390 ENST00000265375.13:390 ENST00000339497.7:390 NM_001282852:390 NM_001282854:390 NM_001282853:390 NM_145012:390 uc001iyw.6:390 uc001iyx.6:390 uc009xmb.5:390 AF413522:390 AY504868:390 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=43 | ||
|distance_to_tss=-398 | |distance_to_tss=-398 | ||
| + | |end=35336484 | ||
|entrez_id=219771 | |entrez_id=219771 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
|gene_alias=C10orf9|CBCP1|CCNX|CFP1 | |gene_alias=C10orf9|CBCP1|CCNX|CFP1 | ||
|gene_description=cyclin Y | |gene_description=cyclin Y | ||
| − | |gene_name=CCNY | + | |gene_id=219771 |
| + | |gene_name=cyclin Y | ||
| + | |gene_source=HGNC:23354 | ||
| + | |gene_symbol=CCNY | ||
| + | |gene_synonyms=CBCP1 CFP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23354 | ||
|nearest_ensembl=ENSG00000108100 | |nearest_ensembl=ENSG00000108100 | ||
|nearest_promoter_id=NM_145012 | |nearest_promoter_id=NM_145012 | ||
|nearest_refseq=NM_145012 | |nearest_refseq=NM_145012 | ||
|nearest_unigene=Hs.14745 | |nearest_unigene=Hs.14745 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=35336467 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK314666 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104685.1 | |tss_id=hg_104685.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RBH6 | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK314666 |
|---|---|
| Distance: | 43 |
| Num_trans: | 13 |
| All_trans: | AK314666:43 ENST00000374704.7:390 ENST00000265375.13:390 ENST00000339497.7:390 NM_001282852:390 NM_001282854:390 NM_001282853:390 NM_145012:390 uc001iyw.6:390 uc001iyx.6:390 uc009xmb.5:390 AF413522:390 AY504868:390 |
TATA-Box annotation
| Distance to TSS: | -398 |
|---|---|
| Nearest PromoterID: | NM_145012 |
| Entrez ID: | 219771 |
| Nearest Unigene: | Hs.14745 |
| Nearest Refseq: | NM_145012 |
| Nearest Ensembl: | ENSG00000108100 |
| Gene Name: | cyclin Y |
| Gene Alias: | C10orf9 |
| Gene Description: | cyclin Y |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
