Difference between revisions of "TSS:Hg 104699.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=29 |entrez_id=219770 |gc_percent=0.502488 |gene_alias=CX40.1 |gene_description=gap junction protein delta 4 |gene_name=GJD4 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000321660.1:-27 NM_153368:-27 uc001iyy.1:-27 AK074504:-27 BC156174:125 BC157014:125 BC160130:125 AJ414564:126 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-27 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=35605442 | ||
|entrez_id=219770 | |entrez_id=219770 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=CX40.1 | |gene_alias=CX40.1 | ||
|gene_description=gap junction protein delta 4 | |gene_description=gap junction protein delta 4 | ||
| − | |gene_name=GJD4 | + | |gene_id=219770 |
| + | |gene_name=gap junction protein delta 4 | ||
| + | |gene_source=HGNC:23296 | ||
| + | |gene_symbol=GJD4 | ||
| + | |gene_synonyms=CX40.1 FLJ90023 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23296 | ||
|nearest_ensembl=ENSG00000177291 | |nearest_ensembl=ENSG00000177291 | ||
|nearest_promoter_id=NM_153368 | |nearest_promoter_id=NM_153368 | ||
|nearest_refseq=NM_153368 | |nearest_refseq=NM_153368 | ||
|nearest_unigene=Hs.638922 | |nearest_unigene=Hs.638922 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=35605436 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000321660.1 NM_153368 uc001iyy.1 AK074504 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104699.1 | |tss_id=hg_104699.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96KN9 | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000321660.1 NM_153368 uc001iyy.1 AK074504 |
|---|---|
| Distance: | -27 |
| Num_trans: | 8 |
| All_trans: | ENST00000321660.1:-27 NM_153368:-27 uc001iyy.1:-27 AK074504:-27 BC156174:125 BC157014:125 BC160130:125 AJ414564:126 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_153368 |
| Entrez ID: | 219770 |
| Nearest Unigene: | Hs.638922 |
| Nearest Refseq: | NM_153368 |
| Nearest Ensembl: | ENSG00000177291 |
| Gene Name: | gap junction protein delta 4 |
| Gene Alias: | CX40.1 |
| Gene Description: | gap junction protein delta 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
