Difference between revisions of "TSS:Hg 104727.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=22 |entrez_id=158160 |gc_percent=0.587065 |gene_alias=HSD17B7|Hsd17b_2|bA291L22.1 |gene_description=hydroxysteroid 17-beta dehyd...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Hsd17b_2= | ||
| + | |all_trans=AK307174:0 AK293968:0 ENST00000494540.5:-7 NR_003086:-7 BC071987:-7 AF165517:-9 AF165514:-10 AY829267:-16 AK295332:-21 ENST00000471365.1:38 CU687208:38 KJ900921:38 | ||
| + | |bA291L22.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=0 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=38356417 | ||
|entrez_id=158160 | |entrez_id=158160 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=HSD17B7|Hsd17b_2|bA291L22.1 | |gene_alias=HSD17B7|Hsd17b_2|bA291L22.1 | ||
|gene_description=hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2 | |gene_description=hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2 | ||
| − | |gene_name=HSD17B7P2 | + | |gene_id=158160 |
| + | |gene_name=hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 | ||
| + | |gene_source=HGNC:28120 | ||
| + | |gene_symbol=HSD17B7P2 | ||
| + | |gene_synonyms=HSD17B7 bA291L22.1 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:28120 | ||
|nearest_ensembl=ENSG00000099251 | |nearest_ensembl=ENSG00000099251 | ||
|nearest_promoter_id=NR_003086 | |nearest_promoter_id=NR_003086 | ||
|nearest_refseq=NM_182829 | |nearest_refseq=NM_182829 | ||
|nearest_unigene=Hs.652484 | |nearest_unigene=Hs.652484 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=38356386 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK307174 AK293968 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104727.1 | |tss_id=hg_104727.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DF79 | ||
}} | }} | ||
Revision as of 21:05, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK307174 AK293968 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AK307174:0 AK293968:0 ENST00000494540.5:-7 NR_003086:-7 BC071987:-7 AF165517:-9 AF165514:-10 AY829267:-16 AK295332:-21 ENST00000471365.1:38 CU687208:38 KJ900921:38 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NR_003086 |
| Entrez ID: | 158160 |
| Nearest Unigene: | Hs.652484 |
| Nearest Refseq: | NM_182829 |
| Nearest Ensembl: | ENSG00000099251 |
| Gene Name: | hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 |
| Gene Alias: | HSD17B7 |
| Gene Description: | hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.09 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
