Difference between revisions of "TSS:Hg 104754.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-4 |entrez_id=53828 |gc_percent=0.661692 |gene_alias=CHIF |gene_description=FXYD domain containing ion transport regulator 4 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000476166.5:0 ENST00000616495.1:0 NM_173160:0 NM_001184963:0 uc001jaq.2:0 uc057swf.1:0 BC054876:0 AY358584:0 ENST00000480834.5:3 uc057swg.1:3 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=0 | ||
|distance_to_tss=-4 | |distance_to_tss=-4 | ||
| + | |end=43371650 | ||
|entrez_id=53828 | |entrez_id=53828 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=CHIF | |gene_alias=CHIF | ||
|gene_description=FXYD domain containing ion transport regulator 4 | |gene_description=FXYD domain containing ion transport regulator 4 | ||
| − | |gene_name=FXYD4 | + | |gene_id=53828 |
| + | |gene_name=FXYD domain containing ion transport regulator 4 | ||
| + | |gene_source=HGNC:4028 | ||
| + | |gene_symbol=FXYD4 | ||
| + | |gene_synonyms=CHIF | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4028 | ||
|nearest_ensembl=ENSG00000150201 | |nearest_ensembl=ENSG00000150201 | ||
|nearest_promoter_id=NM_001184963 | |nearest_promoter_id=NM_001184963 | ||
|nearest_refseq=NM_173160 | |nearest_refseq=NM_173160 | ||
|nearest_unigene=Hs.130497 | |nearest_unigene=Hs.130497 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=43371629 | ||
| + | |strand=+ | ||
|tata_box="-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" | |tata_box="-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" | ||
| + | |transcript_name=ENST00000476166.5 ENST00000616495.1 NM_173160 NM_001184963 uc001jaq.2 uc057swf.1 BC054876 AY358584 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104754.1 | |tss_id=hg_104754.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P59646 | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000476166.5 ENST00000616495.1 NM_173160 NM_001184963 uc001jaq.2 uc057swf.1 BC054876 AY358584 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000476166.5:0 ENST00000616495.1:0 NM_173160:0 NM_001184963:0 uc001jaq.2:0 uc057swf.1:0 BC054876:0 AY358584:0 ENST00000480834.5:3 uc057swg.1:3 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001184963 |
| Entrez ID: | 53828 |
| Nearest Unigene: | Hs.130497 |
| Nearest Refseq: | NM_173160 |
| Nearest Ensembl: | ENSG00000150201 |
| Gene Name: | FXYD domain containing ion transport regulator 4 |
| Gene Alias: | CHIF |
| Gene Description: | FXYD domain containing ion transport regulator 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(GGGTTTAAAGAG,-,0.00),-35(GTTTAAAGAGCC,+,0.00)" |
