Difference between revisions of "TSS:Hg 104761.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=18 |entrez_id=220992 |gc_percent=0.671642 |gene_alias=- |gene_description=zinc finger protein 485 |gene_name=ZNF485 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000361807.7:0 ENST00000480678.1:0 ENST00000430885.5:0 ENST00000374435.3:0 NM_145312:0 NM_001318141:0 NM_001318142:0 NM_001318143:0 NM_001318140:0 uc010qfc.3:0 uc057swt.1:0 uc057swu.1:0 uc057swv.1:0 AK299707:0 AK074679:0 BC014161:0 BX648149:16 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=18 | |distance_to_tss=18 | ||
| + | |end=43606448 | ||
|entrez_id=220992 | |entrez_id=220992 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=zinc finger protein 485 | |gene_description=zinc finger protein 485 | ||
| − | |gene_name=ZNF485 | + | |gene_id=220992 |
| + | |gene_name=zinc finger protein 485 | ||
| + | |gene_source=HGNC:23440 | ||
| + | |gene_symbol=ZNF485 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23440 | ||
|nearest_ensembl=ENSG00000198298 | |nearest_ensembl=ENSG00000198298 | ||
|nearest_promoter_id=NM_001318140 | |nearest_promoter_id=NM_001318140 | ||
|nearest_refseq=NM_145312 | |nearest_refseq=NM_145312 | ||
|nearest_unigene=Hs.147440 | |nearest_unigene=Hs.147440 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=43606402 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000361807.7 ENST00000480678.1 ENST00000430885.5 ENST00000374435.3 NM_145312 NM_001318141 NM_001318142 NM_001318143 NM_001318140 uc010qfc.3 uc057swt.1 uc057swu.1 uc057swv.1 AK299707 AK074679 BC014161 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104761.1 | |tss_id=hg_104761.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R7T5 C9JV60 Q8NCK3 | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000361807.7 ENST00000480678.1 ENST00000430885.5 ENST00000374435.3 NM_145312 NM_001318141 NM_001318142 NM_001318143 NM_001318140 uc010qfc.3 uc057swt.1 uc057swu.1 uc057swv.1 AK299707 AK074679 BC014161 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000361807.7:0 ENST00000480678.1:0 ENST00000430885.5:0 ENST00000374435.3:0 NM_145312:0 NM_001318141:0 NM_001318142:0 NM_001318143:0 NM_001318140:0 uc010qfc.3:0 uc057swt.1:0 uc057swu.1:0 uc057swv.1:0 AK299707:0 AK074679:0 BC014161:0 BX648149:16 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001318140 |
| Entrez ID: | 220992 |
| Nearest Unigene: | Hs.147440 |
| Nearest Refseq: | NM_145312 |
| Nearest Ensembl: | ENSG00000198298 |
| Gene Name: | zinc finger protein 485 |
| Gene Alias: | - |
| Gene Description: | zinc finger protein 485 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
