Difference between revisions of "TSS:Hg 104820.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-96 |entrez_id=414212 |gc_percent=0.621891 |gene_alias=GLUD1P2|GLUDP2|GLUDP7|bA342C24.3 |gene_description=glutamate dehydrogena...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GLUDP2= | ||
| + | |GLUDP7= | ||
| + | |all_trans=BC065722:0 AK307333:0 AL832069:-6 BC017177:7 BC024278:7 NR_003611:-122 ENST00000580094.5:-181 | ||
| + | |bA342C24.3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=-96 | |distance_to_tss=-96 | ||
| + | |end=46786878 | ||
|entrez_id=414212 | |entrez_id=414212 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=GLUD1P2|GLUDP2|GLUDP7|bA342C24.3 | |gene_alias=GLUD1P2|GLUDP2|GLUDP7|bA342C24.3 | ||
|gene_description=glutamate dehydrogenase 1 pseudogene 7 | |gene_description=glutamate dehydrogenase 1 pseudogene 7 | ||
| − | |gene_name= | + | |gene_id=399761 |
| + | |gene_name="BMS1, ribosome biogenesis factor pseudogene 5" | ||
| + | |gene_source=HGNC:23653 | ||
| + | |gene_symbol=BMS1P5 | ||
| + | |gene_synonyms=OTTHUMG00000018157 bA508M1.1 | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:23653 | ||
|nearest_ensembl=ENSG00000265366 | |nearest_ensembl=ENSG00000265366 | ||
|nearest_promoter_id=NR_111968 | |nearest_promoter_id=NR_111968 | ||
|nearest_refseq=NR_048574 | |nearest_refseq=NR_048574 | ||
|nearest_unigene=Hs.661155 | |nearest_unigene=Hs.661155 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=46786854 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC065722 AK307333 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104820.1 | |tss_id=hg_104820.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC065722 AK307333 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC065722:0 AK307333:0 AL832069:-6 BC017177:7 BC024278:7 NR_003611:-122 ENST00000580094.5:-181 |
TATA-Box annotation
| Distance to TSS: | -96 |
|---|---|
| Nearest PromoterID: | NR_111968 |
| Entrez ID: | 414212 |
| Nearest Unigene: | Hs.661155 |
| Nearest Refseq: | NR_048574 |
| Nearest Ensembl: | ENSG00000265366 |
| Gene Name: | "BMS1, ribosome biogenesis factor pseudogene 5" |
| Gene Alias: | GLUD1P2 |
| Gene Description: | glutamate dehydrogenase 1 pseudogene 7 |
| Gene Type: | pseudo |
| CpG%: | 0.105 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
