Difference between revisions of "TSS:Hg 104830.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-156 |entrez_id=2662 |gc_percent=0.726368 |gene_alias=BIP|BMP-3b|BMP3B |gene_description=growth differentiation factor 10 |gene...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |BMP-3b= | ||
| + | |BMP3B= | ||
| + | |all_trans=NM_004962:148 BC028237:148 AK310360:291 AK315322:292 ENST00000580279.1:310 uc001jfb.4:310 D49492:310 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=148 | ||
|distance_to_tss=-156 | |distance_to_tss=-156 | ||
| + | |end=47300076 | ||
|entrez_id=2662 | |entrez_id=2662 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=BIP|BMP-3b|BMP3B | |gene_alias=BIP|BMP-3b|BMP3B | ||
|gene_description=growth differentiation factor 10 | |gene_description=growth differentiation factor 10 | ||
| − | |gene_name=GDF10 | + | |gene_id=2662 |
| + | |gene_name=growth differentiation factor 10 | ||
| + | |gene_source=HGNC:4215 | ||
| + | |gene_symbol=GDF10 | ||
| + | |gene_synonyms=BMP-3b | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4215 | ||
|nearest_ensembl=ENSG00000266524 | |nearest_ensembl=ENSG00000266524 | ||
|nearest_promoter_id=NM_004962 | |nearest_promoter_id=NM_004962 | ||
|nearest_refseq=NM_004962 | |nearest_refseq=NM_004962 | ||
|nearest_unigene=Hs.2171 | |nearest_unigene=Hs.2171 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=47300059 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_004962 BC028237 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104830.1 | |tss_id=hg_104830.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N6T2 | ||
}} | }} | ||
Revision as of 21:09, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_004962 BC028237 |
|---|---|
| Distance: | 148 |
| Num_trans: | 7 |
| All_trans: | NM_004962:148 BC028237:148 AK310360:291 AK315322:292 ENST00000580279.1:310 uc001jfb.4:310 D49492:310 |
TATA-Box annotation
| Distance to TSS: | -156 |
|---|---|
| Nearest PromoterID: | NM_004962 |
| Entrez ID: | 2662 |
| Nearest Unigene: | Hs.2171 |
| Nearest Refseq: | NM_004962 |
| Nearest Ensembl: | ENSG00000266524 |
| Gene Name: | growth differentiation factor 10 |
| Gene Alias: | BIP |
| Gene Description: | growth differentiation factor 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
