Difference between revisions of "TSS:Hg 104835.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-35 |entrez_id=2658 |gc_percent=0.557214 |gene_alias=BMP-9|BMP9|HHT5 |gene_description=growth differentiation factor 2 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BMP9= | ||
| + | |HHT5= | ||
| + | |all_trans=ENST00000581492.2:31 NM_016204:31 uc001jfa.2:31 AK314956:31 AF188285:50 BC069643:128 BC074921:179 EU446620:210 EU446952:210 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=31 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| + | |end=47322459 | ||
|entrez_id=2658 | |entrez_id=2658 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=BMP-9|BMP9|HHT5 | |gene_alias=BMP-9|BMP9|HHT5 | ||
|gene_description=growth differentiation factor 2 | |gene_description=growth differentiation factor 2 | ||
| − | |gene_name=GDF2 | + | |gene_id=2658 |
| + | |gene_name=growth differentiation factor 2 | ||
| + | |gene_source=HGNC:4217 | ||
| + | |gene_symbol=GDF2 | ||
| + | |gene_synonyms=BMP-9 BMP9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4217 | ||
|nearest_ensembl=ENSG00000263761 | |nearest_ensembl=ENSG00000263761 | ||
|nearest_promoter_id=NM_016204 | |nearest_promoter_id=NM_016204 | ||
|nearest_refseq=NM_016204 | |nearest_refseq=NM_016204 | ||
|nearest_unigene=Hs.279463 | |nearest_unigene=Hs.279463 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=47322450 | ||
| + | |strand=+ | ||
|tata_box="-35(GTTTATAGAGCC,+,0.00)" | |tata_box="-35(GTTTATAGAGCC,+,0.00)" | ||
| + | |transcript_name=ENST00000581492.2 NM_016204 uc001jfa.2 AK314956 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104835.1 | |tss_id=hg_104835.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RC63 Q9UK05 | ||
}} | }} | ||
Revision as of 21:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000581492.2 NM_016204 uc001jfa.2 AK314956 |
|---|---|
| Distance: | 31 |
| Num_trans: | 9 |
| All_trans: | ENST00000581492.2:31 NM_016204:31 uc001jfa.2:31 AK314956:31 AF188285:50 BC069643:128 BC074921:179 EU446620:210 EU446952:210 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_016204 |
| Entrez ID: | 2658 |
| Nearest Unigene: | Hs.279463 |
| Nearest Refseq: | NM_016204 |
| Nearest Ensembl: | ENSG00000263761 |
| Gene Name: | growth differentiation factor 2 |
| Gene Alias: | BMP-9 |
| Gene Description: | growth differentiation factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-35(GTTTATAGAGCC,+,0.00)" |
