Difference between revisions of "TSS:Hg 104874.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=32 |entrez_id=100506733 |gc_percent=0.442786 |gene_alias=- |gene_description=FAM170B antisense RNA 1 |gene_name=FAM170B-AS1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000443389.5:-23 uc057tec.1:-23 ENST00000442525.5:-28 NR_038973:-28 uc001jhi.2:-28 AK093055:-28 ENST00000435809.1:210 uc057ted.1:210 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-23 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=49121876 | ||
|entrez_id=100506733 | |entrez_id=100506733 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=FAM170B antisense RNA 1 | |gene_description=FAM170B antisense RNA 1 | ||
| − | |gene_name=FAM170B-AS1 | + | |gene_id=100506733 |
| + | |gene_name=FAM170B antisense RNA 1 | ||
| + | |gene_source=HGNC:45006 | ||
| + | |gene_symbol=FAM170B-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:45006 | ||
|nearest_ensembl=ENSG00000234736 | |nearest_ensembl=ENSG00000234736 | ||
|nearest_promoter_id=NR_038973 | |nearest_promoter_id=NR_038973 | ||
|nearest_refseq=NR_038973 | |nearest_refseq=NR_038973 | ||
|nearest_unigene=Hs.404175 | |nearest_unigene=Hs.404175 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=49121866 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000443389.5 uc057tec.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104874.1 | |tss_id=hg_104874.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000443389.5 uc057tec.1 |
|---|---|
| Distance: | -23 |
| Num_trans: | 8 |
| All_trans: | ENST00000443389.5:-23 uc057tec.1:-23 ENST00000442525.5:-28 NR_038973:-28 uc001jhi.2:-28 AK093055:-28 ENST00000435809.1:210 uc057ted.1:210 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NR_038973 |
| Entrez ID: | 100506733 |
| Nearest Unigene: | Hs.404175 |
| Nearest Refseq: | NR_038973 |
| Nearest Ensembl: | ENSG00000234736 |
| Gene Name: | FAM170B antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | FAM170B antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
