Difference between revisions of "TSS:Hg 104922.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-3 |entrez_id=5592 |gc_percent=0.562189 |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha |gene_desc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PKG= | ||
| + | |PRKG1B= | ||
| + | |PRKGR1B= | ||
| + | |all_trans=NM_001098512:0 AK300110:28 ENST00000373985.5:201 uc001jjm.4:201 D45864:201 | ||
| + | |cGK= | ||
| + | |cGK 1= | ||
| + | |cGK1= | ||
| + | |cGKI= | ||
| + | |cGKI-BETA= | ||
| + | |cGKI-alpha= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
| + | |end=50991157 | ||
|entrez_id=5592 | |entrez_id=5592 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha | |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha | ||
|gene_description="protein kinase, cGMP-dependent, type I" | |gene_description="protein kinase, cGMP-dependent, type I" | ||
| − | |gene_name=PRKG1 | + | |gene_id=5592 |
| + | |gene_name="protein kinase, cGMP-dependent, type I" | ||
| + | |gene_source=HGNC:9414 | ||
| + | |gene_symbol=PRKG1 | ||
| + | |gene_synonyms=PGK PKG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9414 | ||
|nearest_ensembl=ENSG00000185532 | |nearest_ensembl=ENSG00000185532 | ||
|nearest_promoter_id=NM_001098512 | |nearest_promoter_id=NM_001098512 | ||
|nearest_refseq=NM_006258 | |nearest_refseq=NM_006258 | ||
|nearest_unigene=Hs.407535 | |nearest_unigene=Hs.407535 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=50991139 | ||
| + | |strand=+ | ||
|tata_box="-3(GCTTTTAGACTT,+,0.00)" | |tata_box="-3(GCTTTTAGACTT,+,0.00)" | ||
| + | |transcript_name=NM_001098512 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104922.1 | |tss_id=hg_104922.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q13976 | ||
}} | }} | ||
Revision as of 21:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001098512 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NM_001098512:0 AK300110:28 ENST00000373985.5:201 uc001jjm.4:201 D45864:201 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001098512 |
| Entrez ID: | 5592 |
| Nearest Unigene: | Hs.407535 |
| Nearest Refseq: | NM_006258 |
| Nearest Ensembl: | ENSG00000185532 |
| Gene Name: | "protein kinase, cGMP-dependent, type I" |
| Gene Alias: | AAT8 |
| Gene Description: | "protein kinase, cGMP-dependent, type I" |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-3(GCTTTTAGACTT,+,0.00)" |
