Difference between revisions of "TSS:Hg 104944.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=1060 |entrez_id=22943 |gc_percent=0.467662 |gene_alias=DKK-1|SK |gene_description=dickkopf WNT signaling pathway inhibitor 1 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SK= | ||
| + | |all_trans=ENST00000476752.1:-86 uc057thm.1:-86 ENST00000494277.5:-281 uc057thl.1:-281 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=-86 | ||
|distance_to_tss=1060 | |distance_to_tss=1060 | ||
| + | |end=52315344 | ||
|entrez_id=22943 | |entrez_id=22943 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=DKK-1|SK | |gene_alias=DKK-1|SK | ||
|gene_description=dickkopf WNT signaling pathway inhibitor 1 | |gene_description=dickkopf WNT signaling pathway inhibitor 1 | ||
| − | |gene_name=DKK1 | + | |gene_id=22943 |
| + | |gene_name=dickkopf WNT signaling pathway inhibitor 1 | ||
| + | |gene_source=HGNC:2891 | ||
| + | |gene_symbol=DKK1 | ||
| + | |gene_synonyms=DKK-1 SK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2891 | ||
|nearest_ensembl=ENSG00000107984 | |nearest_ensembl=ENSG00000107984 | ||
|nearest_promoter_id=NM_012242 | |nearest_promoter_id=NM_012242 | ||
|nearest_refseq=NM_012242 | |nearest_refseq=NM_012242 | ||
|nearest_unigene=Hs.40499 | |nearest_unigene=Hs.40499 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=52315337 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000476752.1 uc057thm.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104944.1 | |tss_id=hg_104944.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000476752.1 uc057thm.1 |
|---|---|
| Distance: | -86 |
| Num_trans: | 4 |
| All_trans: | ENST00000476752.1:-86 uc057thm.1:-86 ENST00000494277.5:-281 uc057thl.1:-281 |
TATA-Box annotation
| Distance to TSS: | 1060 |
|---|---|
| Nearest PromoterID: | NM_012242 |
| Entrez ID: | 22943 |
| Nearest Unigene: | Hs.40499 |
| Nearest Refseq: | NM_012242 |
| Nearest Ensembl: | ENSG00000107984 |
| Gene Name: | dickkopf WNT signaling pathway inhibitor 1 |
| Gene Alias: | DKK-1 |
| Gene Description: | dickkopf WNT signaling pathway inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
