Difference between revisions of "TSS:Hg 1053.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=127 |entrez_id=101927895 |gc_percent=0.631841 |gene_alias=- |gene_description=uncharacterized LOC101927895 |gene_name=LOC1019278...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000437898.1:0 uc057cvu.1:0 AK096098:-94 NR_135115:-103 NR_135114:-103 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=127 | |distance_to_tss=127 | ||
| + | |end=19210538 | ||
|entrez_id=101927895 | |entrez_id=101927895 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135114 | |nearest_refseq=NR_135114 | ||
|nearest_unigene=Hs.660534 | |nearest_unigene=Hs.660534 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=19210488 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000437898.1 uc057cvu.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1053.1 | |tss_id=hg_1053.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000437898.1 uc057cvu.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000437898.1:0 uc057cvu.1:0 AK096098:-94 NR_135115:-103 NR_135114:-103 |
TATA-Box annotation
| Distance to TSS: | 127 |
|---|---|
| Nearest PromoterID: | NR_135115 |
| Entrez ID: | 101927895 |
| Nearest Unigene: | Hs.660534 |
| Nearest Refseq: | NR_135114 |
| Nearest Ensembl: | ENSG00000230424 |
| Gene Name: | LOC101927895 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927895 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
