Difference between revisions of "TSS:Hg 10530.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-4685 |entrez_id=128272 |gc_percent=0.671642 |gene_alias=WGEF |gene_description=Rho guanine nucleotide exchange factor 19 |gene_...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000475369.1:9 ENST00000442385.5:177 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=9 | ||
|distance_to_tss=-4685 | |distance_to_tss=-4685 | ||
| + | |end=16217376 | ||
|entrez_id=128272 | |entrez_id=128272 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=WGEF | |gene_alias=WGEF | ||
|gene_description=Rho guanine nucleotide exchange factor 19 | |gene_description=Rho guanine nucleotide exchange factor 19 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=anoctamin 7 pseudogene 1 | ||
| + | |gene_source=HGNC:32248 | ||
| + | |gene_symbol=ANO7P1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:32248 | ||
|nearest_ensembl=ENSG00000142632 | |nearest_ensembl=ENSG00000142632 | ||
|nearest_promoter_id=NM_153213 | |nearest_promoter_id=NM_153213 | ||
|nearest_refseq=NM_153213 | |nearest_refseq=NM_153213 | ||
|nearest_unigene=Hs.591532 | |nearest_unigene=Hs.591532 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=16217336 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000475369.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10530.1 | |tss_id=hg_10530.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000475369.1 |
|---|---|
| Distance: | 9 |
| Num_trans: | 2 |
| All_trans: | ENST00000475369.1:9 ENST00000442385.5:177 |
TATA-Box annotation
| Distance to TSS: | -4685 |
|---|---|
| Nearest PromoterID: | NM_153213 |
| Entrez ID: | 128272 |
| Nearest Unigene: | Hs.591532 |
| Nearest Refseq: | NM_153213 |
| Nearest Ensembl: | ENSG00000142632 |
| Gene Name: | anoctamin 7 pseudogene 1 |
| Gene Alias: | WGEF |
| Gene Description: | Rho guanine nucleotide exchange factor 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
