Difference between revisions of "TSS:Hg 105340.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=6 |entrez_id=3098 |gc_percent=0.437811 |gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase |gene_description=hexokina...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HK1-ta= | ||
| + | |HK1-tb= | ||
| + | |HK1-tc= | ||
| + | |HKD= | ||
| + | |HKI= | ||
| + | |HMSNR= | ||
| + | |HXK1= | ||
| + | |all_trans=ENST00000464803.5:0 ENST00000480047.5:0 ENST00000360289.6:0 ENST00000448642.6:0 ENST00000479594.5:0 ENST00000483077.5:0 NM_033500:0 NM_033498:0 NM_033497:0 uc057tti.1:0 uc057ttj.1:0 uc001jpg.5:0 uc001jph.5:0 uc057ttk.1:0 uc057ttl.1:0 U38226:0 U38227:0 U38228:0 AK128226:0 ENST00000476368.5:13 uc057ttm.1:13 ENST00000450646.5:-14 uc057tth.1:-14 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=6 | |distance_to_tss=6 | ||
| + | |end=69270014 | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase | |gene_alias=HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|hexokinase | ||
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
| − | |gene_name=HK1 | + | |gene_id=3098 |
| + | |gene_name=hexokinase 1 | ||
| + | |gene_source=HGNC:4922 | ||
| + | |gene_symbol=HK1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hexokinase= | ||
| + | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
|nearest_promoter_id=NM_001322364 | |nearest_promoter_id=NM_001322364 | ||
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=69269997 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000464803.5 ENST00000480047.5 ENST00000360289.6 ENST00000448642.6 ENST00000479594.5 ENST00000483077.5 NM_033500 NM_033498 NM_033497 uc057tti.1 uc057ttj.1 uc001jpg.5 uc001jph.5 uc057ttk.1 uc057ttl.1 U38226 U38227 U38228 AK128226 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105340.1 | |tss_id=hg_105340.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZK7 B3KXY9 P19367 P78542 Q99609 | ||
}} | }} | ||
Revision as of 21:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000464803.5 ENST00000480047.5 ENST00000360289.6 ENST00000448642.6 ENST00000479594.5 ENST00000483077.5 NM_033500 NM_033498 NM_033497 uc057tti.1 uc057ttj.1 uc001jpg.5 uc001jph.5 uc057ttk.1 uc057ttl.1 U38226 U38227 U38228 AK128226 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000464803.5:0 ENST00000480047.5:0 ENST00000360289.6:0 ENST00000448642.6:0 ENST00000479594.5:0 ENST00000483077.5:0 NM_033500:0 NM_033498:0 NM_033497:0 uc057tti.1:0 uc057ttj.1:0 uc001jpg.5:0 uc001jph.5:0 uc057ttk.1:0 uc057ttl.1:0 U38226:0 U38227:0 U38228:0 AK128226:0 ENST00000476368.5:13 uc057ttm.1:13 ENST00000450646.5:-14 uc057tth.1:-14 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001322364 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
