Difference between revisions of "TSS:Hg 105374.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=211 |entrez_id=55506 |gc_percent=0.621891 |gene_alias=macroH2A2 |gene_description=H2A histone family member Y2 |gene_name=H2AFY2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000373255.8:-11 uc001jqm.4:-11 BC016172:28 AK022776:29 AK131057:33 AF151534:44 AF336304:52 AK022475:60 ENST00000455786.1:63 uc057tuy.1:63 NM_018649:-206 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=-11 | ||
|distance_to_tss=211 | |distance_to_tss=211 | ||
| + | |end=70052817 | ||
|entrez_id=55506 | |entrez_id=55506 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=macroH2A2 | |gene_alias=macroH2A2 | ||
|gene_description=H2A histone family member Y2 | |gene_description=H2A histone family member Y2 | ||
| − | |gene_name=H2AFY2 | + | |gene_id=55506 |
| + | |gene_name=H2A histone family member Y2 | ||
| + | |gene_source=HGNC:14453 | ||
| + | |gene_symbol=H2AFY2 | ||
| + | |gene_synonyms=macroH2A2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14453 | ||
|nearest_ensembl=ENSG00000099284 | |nearest_ensembl=ENSG00000099284 | ||
|nearest_promoter_id=NM_018649 | |nearest_promoter_id=NM_018649 | ||
|nearest_refseq=NM_018649 | |nearest_refseq=NM_018649 | ||
|nearest_unigene=Hs.499953 | |nearest_unigene=Hs.499953 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=70052806 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000373255.8 uc001jqm.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105374.1 | |tss_id=hg_105374.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZP6 Q9P0M6 | ||
}} | }} | ||
Revision as of 21:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373255.8 uc001jqm.4 |
|---|---|
| Distance: | -11 |
| Num_trans: | 11 |
| All_trans: | ENST00000373255.8:-11 uc001jqm.4:-11 BC016172:28 AK022776:29 AK131057:33 AF151534:44 AF336304:52 AK022475:60 ENST00000455786.1:63 uc057tuy.1:63 NM_018649:-206 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_018649 |
| Entrez ID: | 55506 |
| Nearest Unigene: | Hs.499953 |
| Nearest Refseq: | NM_018649 |
| Nearest Ensembl: | ENSG00000099284 |
| Gene Name: | H2A histone family member Y2 |
| Gene Alias: | macroH2A2 |
| Gene Description: | H2A histone family member Y2 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
