Difference between revisions of "TSS:Hg 105425.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-89236 |entrez_id=102723377 |gc_percent=0.467662 |gene_alias=C10orf106|NCRNA00223|bA327E2.3 |gene_description=CDH23 antisense R...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00223= | ||
| + | |bA327E2.3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance= | ||
|distance_to_tss=-89236 | |distance_to_tss=-89236 | ||
| + | |end=71601163 | ||
|entrez_id=102723377 | |entrez_id=102723377 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NR_120672 | |nearest_refseq=NR_120672 | ||
|nearest_unigene=Hs.568789 | |nearest_unigene=Hs.568789 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=71601149 | ||
| + | |strand=+ | ||
|tata_box="68(TGGCATTAAAGG,-,0.00),70(GCATTAAAGGCC,+,0.00)" | |tata_box="68(TGGCATTAAAGG,-,0.00),70(GCATTAAAGGCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_105425.1 | |tss_id=hg_105425.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:35, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -89236 |
|---|---|
| Nearest PromoterID: | NR_120672 |
| Entrez ID: | 102723377 |
| Nearest Unigene: | Hs.568789 |
| Nearest Refseq: | NR_120672 |
| Nearest Ensembl: | ENSG00000223817 |
| Gene Name: | CDH23-AS1 |
| Gene Alias: | C10orf106 |
| Gene Description: | CDH23 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "68(TGGCATTAAAGG,-,0.00),70(GCATTAAAGGCC,+,0.00)" |
