Difference between revisions of "TSS:Hg 105481.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-343 |entrez_id=119504 |gc_percent=0.492537 |gene_alias=APC16|C10orf104|CENP-27|MSAG|bA570G20.3 |gene_description=anaphase promo...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C10orf104= | ||
| + | |CENP-27= | ||
| + | |MSAG= | ||
| + | |all_trans=ENST00000615507.4:336 ENST00000621663.4:336 NM_001242548:336 NM_001242547:336 NR_038391:336 NM_001242546:336 NM_173473:336 NR_038392:336 uc021pss.2:336 uc001jsw.4:336 ENST00000478193.5:365 uc021psq.2:365 EU552924:377 ENST00000299381.4:384 uc001jsv.4:384 BC009530:384 | ||
| + | |bA570G20.3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=336 | ||
|distance_to_tss=-343 | |distance_to_tss=-343 | ||
| + | |end=72215664 | ||
|entrez_id=119504 | |entrez_id=119504 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
|gene_alias=APC16|C10orf104|CENP-27|MSAG|bA570G20.3 | |gene_alias=APC16|C10orf104|CENP-27|MSAG|bA570G20.3 | ||
|gene_description=anaphase promoting complex subunit 16 | |gene_description=anaphase promoting complex subunit 16 | ||
| − | |gene_name=ANAPC16 | + | |gene_id=119504 |
| + | |gene_name=anaphase promoting complex subunit 16 | ||
| + | |gene_source=HGNC:26976 | ||
| + | |gene_symbol=ANAPC16 | ||
| + | |gene_synonyms=APC16 CENP-27 FLJ33728 bA570G20.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26976 | ||
|nearest_ensembl=ENSG00000166295 | |nearest_ensembl=ENSG00000166295 | ||
|nearest_promoter_id=NM_173473 | |nearest_promoter_id=NM_173473 | ||
|nearest_refseq=NM_173473 | |nearest_refseq=NM_173473 | ||
|nearest_unigene=Hs.426296 | |nearest_unigene=Hs.426296 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=72215650 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000615507.4 ENST00000621663.4 NM_001242548 NM_001242547 NR_038391 NM_001242546 NM_173473 NR_038392 uc021pss.2 uc001jsw.4 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105481.1 | |tss_id=hg_105481.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A087WUN5 C5H3H2 Q96DE5 | ||
}} | }} | ||
Revision as of 21:37, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000615507.4 ENST00000621663.4 NM_001242548 NM_001242547 NR_038391 NM_001242546 NM_173473 NR_038392 uc021pss.2 uc001jsw.4 |
|---|---|
| Distance: | 336 |
| Num_trans: | 16 |
| All_trans: | ENST00000615507.4:336 ENST00000621663.4:336 NM_001242548:336 NM_001242547:336 NR_038391:336 NM_001242546:336 NM_173473:336 NR_038392:336 uc021pss.2:336 uc001jsw.4:336 ENST00000478193.5:365 uc021psq.2:365 EU552924:377 ENST00000299381.4:384 uc001jsv.4:384 BC009530:384 |
TATA-Box annotation
| Distance to TSS: | -343 |
|---|---|
| Nearest PromoterID: | NM_173473 |
| Entrez ID: | 119504 |
| Nearest Unigene: | Hs.426296 |
| Nearest Refseq: | NM_173473 |
| Nearest Ensembl: | ENSG00000166295 |
| Gene Name: | anaphase promoting complex subunit 16 |
| Gene Alias: | APC16 |
| Gene Description: | anaphase promoting complex subunit 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
