Difference between revisions of "TSS:Hg 105544.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=10 |entrez_id=170384 |gc_percent=0.706468 |gene_alias=- |gene_description=fucosyltransferase 11 |gene_name=FUT11 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000394790.2:0 ENST00000372841.7:0 NM_173540:0 NM_001284194:0 uc001juz.3:0 uc001jva.4:0 BC036037:0 BC100994:0 BC100995:0 BC100996:0 BC100997:0 AK314944:0 DQ894378:2 EU176260:2 ENST00000465695.1:233 uc057ucy.1:233 AK095482:233 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
| + | |end=73772331 | ||
|entrez_id=170384 | |entrez_id=170384 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=fucosyltransferase 11 | |gene_description=fucosyltransferase 11 | ||
| − | |gene_name=FUT11 | + | |gene_id=170384 |
| + | |gene_name="fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" | ||
| + | |gene_source=HGNC:19233 | ||
| + | |gene_symbol=FUT11 | ||
| + | |gene_synonyms=MGC33202 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19233 | ||
|nearest_ensembl=ENSG00000196968 | |nearest_ensembl=ENSG00000196968 | ||
|nearest_promoter_id=NM_001284194 | |nearest_promoter_id=NM_001284194 | ||
|nearest_refseq=NM_173540 | |nearest_refseq=NM_173540 | ||
|nearest_unigene=Hs.588854 | |nearest_unigene=Hs.588854 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=73772270 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000394790.2 ENST00000372841.7 NM_173540 NM_001284194 uc001juz.3 uc001jva.4 BC036037 BC100994 BC100995 BC100996 BC100997 AK314944 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105544.1 | |tss_id=hg_105544.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RC53 Q495W5 | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000394790.2 ENST00000372841.7 NM_173540 NM_001284194 uc001juz.3 uc001jva.4 BC036037 BC100994 BC100995 BC100996 BC100997 AK314944 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000394790.2:0 ENST00000372841.7:0 NM_173540:0 NM_001284194:0 uc001juz.3:0 uc001jva.4:0 BC036037:0 BC100994:0 BC100995:0 BC100996:0 BC100997:0 AK314944:0 DQ894378:2 EU176260:2 ENST00000465695.1:233 uc057ucy.1:233 AK095482:233 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001284194 |
| Entrez ID: | 170384 |
| Nearest Unigene: | Hs.588854 |
| Nearest Refseq: | NM_173540 |
| Nearest Ensembl: | ENSG00000196968 |
| Gene Name: | "fucosyltransferase 11 (alpha (1,3) fucosyltransferase)" |
| Gene Alias: | - |
| Gene Description: | fucosyltransferase 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
