Difference between revisions of "TSS:Hg 105554.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=21 |entrez_id=23053 |gc_percent=0.701493 |gene_alias=KIAA0913 |gene_description=zinc finger SWIM-type containing 8 |gene_name=Z...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000446546.2:0 ENST00000604524.5:0 uc057udc.1:0 uc001jvf.4:0 BC137249:0 BC137250:0 ENST00000605216.5:6 uc009xrl.4:6 BC151206:6 ENST00000603114.5:-10 ENST00000398706.6:-10 NM_001242488:-10 NM_001242487:-10 NM_015037:-10 uc057udb.1:-10 uc001jve.4:-10 AB020720:-10 ENST00000433366.6:27 uc057udd.1:27 ENST00000604729.5:-52 uc057uda.1:-52 AK091621:-57 AB384542:221 BC156550:221 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=21 | |distance_to_tss=21 | ||
| + | |end=73785656 | ||
|entrez_id=23053 | |entrez_id=23053 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
|gene_alias=KIAA0913 | |gene_alias=KIAA0913 | ||
|gene_description=zinc finger SWIM-type containing 8 | |gene_description=zinc finger SWIM-type containing 8 | ||
| − | |gene_name=ZSWIM8 | + | |gene_id=23053 |
| + | |gene_name=zinc finger SWIM-type containing 8 | ||
| + | |gene_source=HGNC:23528 | ||
| + | |gene_symbol=ZSWIM8 | ||
| + | |gene_synonyms=4832404P21Rik | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23528 | ||
|nearest_ensembl=ENSG00000214655 | |nearest_ensembl=ENSG00000214655 | ||
|nearest_promoter_id=NM_001242488 | |nearest_promoter_id=NM_001242488 | ||
|nearest_refseq=NM_015037 | |nearest_refseq=NM_015037 | ||
|nearest_unigene=Hs.65135 | |nearest_unigene=Hs.65135 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=73785633 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000446546.2 ENST00000604524.5 uc057udc.1 uc001jvf.4 BC137249 BC137250 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105554.1 | |tss_id=hg_105554.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=S4R3H3 | ||
}} | }} | ||
Revision as of 21:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000446546.2 ENST00000604524.5 uc057udc.1 uc001jvf.4 BC137249 BC137250 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000446546.2:0 ENST00000604524.5:0 uc057udc.1:0 uc001jvf.4:0 BC137249:0 BC137250:0 ENST00000605216.5:6 uc009xrl.4:6 BC151206:6 ENST00000603114.5:-10 ENST00000398706.6:-10 NM_001242488:-10 NM_001242487:-10 NM_015037:-10 uc057udb.1:-10 uc001jve.4:-10 AB020720:-10 ENST00000433366.6:27 uc057udd.1:27 ENST00000604729.5:-52 uc057uda.1:-52 AK091621:-57 AB384542:221 BC156550:221 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_001242488 |
| Entrez ID: | 23053 |
| Nearest Unigene: | Hs.65135 |
| Nearest Refseq: | NM_015037 |
| Nearest Ensembl: | ENSG00000214655 |
| Gene Name: | zinc finger SWIM-type containing 8 |
| Gene Alias: | KIAA0913 |
| Gene Description: | zinc finger SWIM-type containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
