Difference between revisions of "TSS:Hg 10567.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-11155 |entrez_id=23400 |gc_percent=0.437811 |gene_alias=CLN12|HSA9947|KRPPD|PARK9 |gene_description=ATPase 13A2 |gene_name=ATP1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSA9947= | ||
| + | |KRPPD= | ||
| + | |PARK9= | ||
| + | |all_trans=ENST00000475049.5:-24 uc057ctr.1:-24 ENST00000485092.5:83 uc057ctq.1:83 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-24 | ||
|distance_to_tss=-11155 | |distance_to_tss=-11155 | ||
| + | |end=17023136 | ||
|entrez_id=23400 | |entrez_id=23400 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=CLN12|HSA9947|KRPPD|PARK9 | |gene_alias=CLN12|HSA9947|KRPPD|PARK9 | ||
|gene_description=ATPase 13A2 | |gene_description=ATPase 13A2 | ||
| − | |gene_name= | + | |gene_id=6390 |
| + | |gene_name=succinate dehydrogenase complex iron sulfur subunit B | ||
| + | |gene_source=HGNC:10681 | ||
| + | |gene_symbol=SDHB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10681 | ||
|nearest_ensembl=ENSG00000159363 | |nearest_ensembl=ENSG00000159363 | ||
|nearest_promoter_id=NM_001141974 | |nearest_promoter_id=NM_001141974 | ||
|nearest_refseq=NM_022089 | |nearest_refseq=NM_022089 | ||
|nearest_unigene=Hs.128866 | |nearest_unigene=Hs.128866 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=17023118 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000475049.5 uc057ctr.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10567.1 | |tss_id=hg_10567.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:45, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000475049.5 uc057ctr.1 |
|---|---|
| Distance: | -24 |
| Num_trans: | 4 |
| All_trans: | ENST00000475049.5:-24 uc057ctr.1:-24 ENST00000485092.5:83 uc057ctq.1:83 |
TATA-Box annotation
| Distance to TSS: | -11155 |
|---|---|
| Nearest PromoterID: | NM_001141974 |
| Entrez ID: | 23400 |
| Nearest Unigene: | Hs.128866 |
| Nearest Refseq: | NM_022089 |
| Nearest Ensembl: | ENSG00000159363 |
| Gene Name: | succinate dehydrogenase complex iron sulfur subunit B |
| Gene Alias: | CLN12 |
| Gene Description: | ATPase 13A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
