Difference between revisions of "TSS:Hg 105707.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=-12 |entrez_id=57178 |gc_percent=0.671642 |gene_alias=MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 |gene_description=zinc finger MIZ-type...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RAI17= | ||
| + | |TRAFIP10= | ||
| + | |ZIMP10= | ||
| + | |all_trans=ENST00000334512.9:7 NM_020338:7 uc001kaf.3:7 BC007288:7 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=7 | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
| + | |end=79069028 | ||
|entrez_id=57178 | |entrez_id=57178 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 | |gene_alias=MIZ|RAI17|TRAFIP10|ZIMP10|hZIMP10 | ||
|gene_description=zinc finger MIZ-type containing 1 | |gene_description=zinc finger MIZ-type containing 1 | ||
| − | |gene_name=ZMIZ1 | + | |gene_id=57178 |
| + | |gene_name=zinc finger MIZ-type containing 1 | ||
| + | |gene_source=HGNC:16493 | ||
| + | |gene_symbol=ZMIZ1 | ||
| + | |gene_synonyms=FLJ13541 KIAA1224 MIZ RP11-519K18.1 Zimp10 hZIMP10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hZIMP10= | ||
| + | |hgnc_mgi_id=HGNC:16493 | ||
|nearest_ensembl=ENSG00000108175 | |nearest_ensembl=ENSG00000108175 | ||
|nearest_promoter_id=NM_020338 | |nearest_promoter_id=NM_020338 | ||
|nearest_refseq=NM_020338 | |nearest_refseq=NM_020338 | ||
|nearest_unigene=Hs.193118 | |nearest_unigene=Hs.193118 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=79069017 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000334512.9 NM_020338 uc001kaf.3 BC007288 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105707.1 | |tss_id=hg_105707.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0JLS3 Q9ULJ6 | ||
}} | }} | ||
Revision as of 21:47, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000334512.9 NM_020338 uc001kaf.3 BC007288 |
|---|---|
| Distance: | 7 |
| Num_trans: | 4 |
| All_trans: | ENST00000334512.9:7 NM_020338:7 uc001kaf.3:7 BC007288:7 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_020338 |
| Entrez ID: | 57178 |
| Nearest Unigene: | Hs.193118 |
| Nearest Refseq: | NM_020338 |
| Nearest Ensembl: | ENSG00000108175 |
| Gene Name: | zinc finger MIZ-type containing 1 |
| Gene Alias: | MIZ |
| Gene Description: | zinc finger MIZ-type containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
