Difference between revisions of "TSS:Hg 105870.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.195 |distance_to_tss=0 |entrez_id=81619 |gc_percent=0.825871 |gene_alias=DC-TM4F2|TM4SF14 |gene_description=tetraspanin 14 |gene_name=TSPAN14 |gene_...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |TM4SF14= | ||
| + | |all_trans=NM_001128309:0 NM_030927:0 BC093016:0 ENST00000481124.5:-11 uc009xss.4:-11 AK295321:23 AL136638:23 AK074558:23 AF311903:29 ENST00000372157.6:34 uc057uno.1:34 ENST00000469149.1:41 uc057unp.1:41 ENST00000372164.7:42 uc001kci.5:42 BC002920:48 ENST00000372158.5:65 uc057unq.1:65 ENST00000341863.10:67 uc057unr.1:67 ENST00000429989.7:-110 uc001kcj.5:-110 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
| + | |distance=0 | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
| + | |end=80454288 | ||
|entrez_id=81619 | |entrez_id=81619 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
|gene_alias=DC-TM4F2|TM4SF14 | |gene_alias=DC-TM4F2|TM4SF14 | ||
|gene_description=tetraspanin 14 | |gene_description=tetraspanin 14 | ||
| − | |gene_name=TSPAN14 | + | |gene_id=81619 |
| + | |gene_name=tetraspanin 14 | ||
| + | |gene_source=HGNC:23303 | ||
| + | |gene_symbol=TSPAN14 | ||
| + | |gene_synonyms=DC-TM4F2 MGC11352 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23303 | ||
|nearest_ensembl=ENSG00000108219 | |nearest_ensembl=ENSG00000108219 | ||
|nearest_promoter_id=NM_030927 | |nearest_promoter_id=NM_030927 | ||
|nearest_refseq=NM_030927 | |nearest_refseq=NM_030927 | ||
|nearest_unigene=Hs.718943 | |nearest_unigene=Hs.718943 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=80454275 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001128309 NM_030927 BC093016 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105870.1 | |tss_id=hg_105870.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8NG11 | ||
}} | }} | ||
Revision as of 21:54, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001128309 NM_030927 BC093016 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | NM_001128309:0 NM_030927:0 BC093016:0 ENST00000481124.5:-11 uc009xss.4:-11 AK295321:23 AL136638:23 AK074558:23 AF311903:29 ENST00000372157.6:34 uc057uno.1:34 ENST00000469149.1:41 uc057unp.1:41 ENST00000372164.7:42 uc001kci.5:42 BC002920:48 ENST00000372158.5:65 uc057unq.1:65 ENST00000341863.10:67 uc057unr.1:67 ENST00000429989.7:-110 uc001kcj.5:-110 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_030927 |
| Entrez ID: | 81619 |
| Nearest Unigene: | Hs.718943 |
| Nearest Refseq: | NM_030927 |
| Nearest Ensembl: | ENSG00000108219 |
| Gene Name: | tetraspanin 14 |
| Gene Alias: | DC-TM4F2 |
| Gene Description: | tetraspanin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
