Difference between revisions of "TSS:Hg 105926.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=75 |entrez_id=27069 |gc_percent=0.631841 |gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 |gene_description=growth hormone i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSPC282= | ||
| + | |MICS1= | ||
| + | |My021= | ||
| + | |PTD010= | ||
| + | |TMBIM5= | ||
| + | |all_trans=ENST00000618907.3:0 uc057uon.1:0 AF131820:0 AF078863:0 AL136713:2 AF161400:3 AK299937:-8 AK130094:9 BC022872:31 AK225318:35 AF060923:38 AK298332:39 AK098770:39 BC010354:42 AK130097:44 AK297960:45 AK292864:46 AY358824:49 ENST00000372134.5:-52 uc001kcs.2:-52 NM_014394:-63 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=0 | ||
|distance_to_tss=75 | |distance_to_tss=75 | ||
| + | |end=84139517 | ||
|entrez_id=27069 | |entrez_id=27069 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 | |gene_alias=DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 | ||
|gene_description=growth hormone inducible transmembrane protein | |gene_description=growth hormone inducible transmembrane protein | ||
| − | |gene_name=GHITM | + | |gene_id=27069 |
| + | |gene_name=growth hormone inducible transmembrane protein | ||
| + | |gene_source=HGNC:17281 | ||
| + | |gene_symbol=GHITM | ||
| + | |gene_synonyms=DERP2 HSPC282 My021 PTD010 TMBIM5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17281 | ||
|nearest_ensembl=ENSG00000165678 | |nearest_ensembl=ENSG00000165678 | ||
|nearest_promoter_id=NM_014394 | |nearest_promoter_id=NM_014394 | ||
|nearest_refseq=NM_014394 | |nearest_refseq=NM_014394 | ||
|nearest_unigene=Hs.352656 | |nearest_unigene=Hs.352656 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=84139491 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000618907.3 uc057uon.1 AF131820 AF078863 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105926.1 | |tss_id=hg_105926.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9Y6G2 | ||
}} | }} | ||
Revision as of 21:56, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000618907.3 uc057uon.1 AF131820 AF078863 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000618907.3:0 uc057uon.1:0 AF131820:0 AF078863:0 AL136713:2 AF161400:3 AK299937:-8 AK130094:9 BC022872:31 AK225318:35 AF060923:38 AK298332:39 AK098770:39 BC010354:42 AK130097:44 AK297960:45 AK292864:46 AY358824:49 ENST00000372134.5:-52 uc001kcs.2:-52 NM_014394:-63 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NM_014394 |
| Entrez ID: | 27069 |
| Nearest Unigene: | Hs.352656 |
| Nearest Refseq: | NM_014394 |
| Nearest Ensembl: | ENSG00000165678 |
| Gene Name: | growth hormone inducible transmembrane protein |
| Gene Alias: | DERP2 |
| Gene Description: | growth hormone inducible transmembrane protein |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
