Difference between revisions of "TSS:Hg 106060.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=54 |entrez_id=8513 |gc_percent=0.323383 |gene_alias=GL|HGL|HLAL |gene_description="lipase F, gastric type" |gene_name=LIPF |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HGL= | ||
| + | |HLAL= | ||
| + | |all_trans=ENST00000394375.7:0 ENST00000608620.5:0 ENST00000609378.1:0 uc010qmt.3:0 uc010qmu.3:0 uc057usv.1:0 AK308224:0 AK301310:0 AK301320:0 AK310128:0 AK312940:0 AK223468:0 ENST00000238983.8:11 uc001kfg.3:11 ENST00000355843.2:12 uc001kfh.3:12 AL833751:12 X05997:13 NM_001198828:-51 NM_004190:-51 NM_001198829:-51 NM_001198830:-51 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=0 | ||
|distance_to_tss=54 | |distance_to_tss=54 | ||
| + | |end=88664446 | ||
|entrez_id=8513 | |entrez_id=8513 | ||
|gc_percent=0.323383 | |gc_percent=0.323383 | ||
|gene_alias=GL|HGL|HLAL | |gene_alias=GL|HGL|HLAL | ||
|gene_description="lipase F, gastric type" | |gene_description="lipase F, gastric type" | ||
| − | |gene_name=LIPF | + | |gene_id=8513 |
| + | |gene_name="lipase F, gastric type" | ||
| + | |gene_source=HGNC:6622 | ||
| + | |gene_symbol=LIPF | ||
| + | |gene_synonyms=HGL HLAL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6622 | ||
|nearest_ensembl=ENSG00000182333 | |nearest_ensembl=ENSG00000182333 | ||
|nearest_promoter_id=NM_001198828 | |nearest_promoter_id=NM_001198828 | ||
|nearest_refseq=NM_004190 | |nearest_refseq=NM_004190 | ||
|nearest_unigene=Hs.523130 | |nearest_unigene=Hs.523130 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=88664439 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000394375.7 ENST00000608620.5 ENST00000609378.1 uc010qmt.3 uc010qmu.3 uc057usv.1 AK308224 AK301310 AK301320 AK310128 AK312940 AK223468 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106060.1 | |tss_id=hg_106060.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P07098 Q53F21 | ||
}} | }} | ||
Revision as of 22:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000394375.7 ENST00000608620.5 ENST00000609378.1 uc010qmt.3 uc010qmu.3 uc057usv.1 AK308224 AK301310 AK301320 AK310128 AK312940 AK223468 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000394375.7:0 ENST00000608620.5:0 ENST00000609378.1:0 uc010qmt.3:0 uc010qmu.3:0 uc057usv.1:0 AK308224:0 AK301310:0 AK301320:0 AK310128:0 AK312940:0 AK223468:0 ENST00000238983.8:11 uc001kfg.3:11 ENST00000355843.2:12 uc001kfh.3:12 AL833751:12 X05997:13 NM_001198828:-51 NM_004190:-51 NM_001198829:-51 NM_001198830:-51 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_001198828 |
| Entrez ID: | 8513 |
| Nearest Unigene: | Hs.523130 |
| Nearest Refseq: | NM_004190 |
| Nearest Ensembl: | ENSG00000182333 |
| Gene Name: | "lipase F, gastric type" |
| Gene Alias: | GL |
| Gene Description: | "lipase F, gastric type" |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.323383 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
