Difference between revisions of "TSS:Hg 106096.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=247 |entrez_id=355 |gc_percent=0.636816 |gene_alias=ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 |gene_description=Fas cell surface...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |APO-1= | ||
| + | |APT1= | ||
| + | |CD95= | ||
| + | |FAS1= | ||
| + | |FASTM= | ||
| + | |TNFRSF6= | ||
| + | |all_trans=ENST00000357339.6:0 ENST00000488877.5:0 ENST00000494410.5:0 ENST00000479522.5:0 uc001kft.4:0 uc057uto.1:0 uc057utp.1:0 uc001kfw.4:0 X83490:0 X83491:0 X83492:0 X83493:0 DQ894675:0 KJ890693:0 KR709616:0 KR709617:0 KR709618:0 KR709619:0 ENST00000492756.5:1 ENST00000355279.2:1 uc001kfs.4:1 uc057utq.1:1 X89101:1 CR450307:1 FJ200481:1 FJ373045:1 FJ373046:1 FM246457:1 FM246458:1 FM246459:1 Z47993:1 Z47994:1 Z47995:1 Z66556:1 Z70519:1 Z70520:1 ENST00000484444.5:-6 uc057utn.1:-6 ENST00000352159.8:-50 uc057utm.1:-50 ENST00000612663.4:-54 uc057utl.1:-54 M67454:-54 AY495076:-54 EU481974:-54 ENST00000355740.6:-80 uc001kfr.4:-80 X63717:-80 ENST00000460510.5:84 uc057utr.1:84 AK290978:-106 ENST00000477270.5:144 uc057uts.1:144 BC012479:-170 NM_000043:-178 NM_001320619:-178 NM_152871:-178 NM_152872:-178 NR_028033:-178 NR_028034:-178 NR_028035:-178 NR_028036:-178 NR_135313:-178 ENST00000626542.2:-206 ENST00000615406.4:-206 uc057utj.1:-206 uc057utk.1:-206 ENST00000313771.9:412 NR_135314:412 NR_135315:412 uc009xtp.4:412 AK311424:412 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=0 | ||
|distance_to_tss=247 | |distance_to_tss=247 | ||
| + | |end=88990876 | ||
|entrez_id=355 | |entrez_id=355 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 | |gene_alias=ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 | ||
|gene_description=Fas cell surface death receptor | |gene_description=Fas cell surface death receptor | ||
| − | |gene_name=FAS | + | |gene_id=355 |
| + | |gene_name=Fas cell surface death receptor | ||
| + | |gene_source=HGNC:11920 | ||
| + | |gene_symbol=FAS | ||
| + | |gene_synonyms=APO-1 CD95 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11920 | ||
|nearest_ensembl=ENSG00000026103 | |nearest_ensembl=ENSG00000026103 | ||
|nearest_promoter_id=NR_028033 | |nearest_promoter_id=NR_028033 | ||
|nearest_refseq=NM_000043 | |nearest_refseq=NM_000043 | ||
|nearest_unigene=Hs.244139 | |nearest_unigene=Hs.244139 | ||
| + | |num_trans=72 | ||
| + | |species=human | ||
| + | |start=88990736 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000357339.6 ENST00000488877.5 ENST00000494410.5 ENST00000479522.5 uc001kft.4 uc057uto.1 uc057utp.1 uc001kfw.4 X83490 X83491 X83492 X83493 DQ894675 KJ890693 KR709616 KR709617 KR709618 KR709619 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106096.1 | |tss_id=hg_106096.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P25445 | ||
}} | }} | ||
Revision as of 22:03, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000357339.6 ENST00000488877.5 ENST00000494410.5 ENST00000479522.5 uc001kft.4 uc057uto.1 uc057utp.1 uc001kfw.4 X83490 X83491 X83492 X83493 DQ894675 KJ890693 KR709616 KR709617 KR709618 KR709619 |
|---|---|
| Distance: | 0 |
| Num_trans: | 72 |
| All_trans: | ENST00000357339.6:0 ENST00000488877.5:0 ENST00000494410.5:0 ENST00000479522.5:0 uc001kft.4:0 uc057uto.1:0 uc057utp.1:0 uc001kfw.4:0 X83490:0 X83491:0 X83492:0 X83493:0 DQ894675:0 KJ890693:0 KR709616:0 KR709617:0 KR709618:0 KR709619:0 ENST00000492756.5:1 ENST00000355279.2:1 uc001kfs.4:1 uc057utq.1:1 X89101:1 CR450307:1 FJ200481:1 FJ373045:1 FJ373046:1 FM246457:1 FM246458:1 FM246459:1 Z47993:1 Z47994:1 Z47995:1 Z66556:1 Z70519:1 Z70520:1 ENST00000484444.5:-6 uc057utn.1:-6 ENST00000352159.8:-50 uc057utm.1:-50 ENST00000612663.4:-54 uc057utl.1:-54 M67454:-54 AY495076:-54 EU481974:-54 ENST00000355740.6:-80 uc001kfr.4:-80 X63717:-80 ENST00000460510.5:84 uc057utr.1:84 AK290978:-106 ENST00000477270.5:144 uc057uts.1:144 BC012479:-170 NM_000043:-178 NM_001320619:-178 NM_152871:-178 NM_152872:-178 NR_028033:-178 NR_028034:-178 NR_028035:-178 NR_028036:-178 NR_135313:-178 ENST00000626542.2:-206 ENST00000615406.4:-206 uc057utj.1:-206 uc057utk.1:-206 ENST00000313771.9:412 NR_135314:412 NR_135315:412 uc009xtp.4:412 AK311424:412 |
TATA-Box annotation
| Distance to TSS: | 247 |
|---|---|
| Nearest PromoterID: | NR_028033 |
| Entrez ID: | 355 |
| Nearest Unigene: | Hs.244139 |
| Nearest Refseq: | NM_000043 |
| Nearest Ensembl: | ENSG00000026103 |
| Gene Name: | Fas cell surface death receptor |
| Gene Alias: | ALPS1A |
| Gene Description: | Fas cell surface death receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
