Difference between revisions of "TSS:Hg 106107.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-18110 |entrez_id=3433 |gc_percent=0.467662 |gene_alias=G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GARG-39= | ||
| + | |IFI-54= | ||
| + | |IFI-54K= | ||
| + | |IFI54= | ||
| + | |IFIT-2= | ||
| + | |ISG-54 K= | ||
| + | |ISG-54K= | ||
| + | |ISG54= | ||
| + | |P54= | ||
| + | |all_trans=ENST00000437032.1:-25 uc057uue.1:-25 ENST00000448897.1:-32 uc057uud.1:-32 ENST00000354541.7:-66 uc057uuc.1:-66 | ||
| + | |chr=chr10 | ||
| + | |cig42= | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-25 | ||
|distance_to_tss=-18110 | |distance_to_tss=-18110 | ||
| + | |end=89283848 | ||
|entrez_id=3433 | |entrez_id=3433 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 26: | ||
|nearest_refseq=NM_001547 | |nearest_refseq=NM_001547 | ||
|nearest_unigene=Hs.437609 | |nearest_unigene=Hs.437609 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=89283830 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000437032.1 uc057uue.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106107.1 | |tss_id=hg_106107.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:04, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000437032.1 uc057uue.1 |
|---|---|
| Distance: | -25 |
| Num_trans: | 6 |
| All_trans: | ENST00000437032.1:-25 uc057uue.1:-25 ENST00000448897.1:-32 uc057uud.1:-32 ENST00000354541.7:-66 uc057uuc.1:-66 |
TATA-Box annotation
| Distance to TSS: | -18110 |
|---|---|
| Nearest PromoterID: | NM_001547 |
| Entrez ID: | 3433 |
| Nearest Unigene: | Hs.437609 |
| Nearest Refseq: | NM_001547 |
| Nearest Ensembl: | ENSG00000119922 |
| Gene Name: | IFIT2 |
| Gene Alias: | G10P2 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
