Difference between revisions of "TSS:Hg 106206.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.19 |distance_to_tss=7 |entrez_id=84333 |gc_percent=0.845771 |gene_alias=RNF159 |gene_description=polycomb group ring finger 5 |gene_name=PCGF5 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000614189.4:0 NM_001257101:0 NR_046435:0 uc001khh.5:0 BC007377:0 BC051845:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| + | |distance=0 | ||
|distance_to_tss=7 | |distance_to_tss=7 | ||
| + | |end=91163078 | ||
|entrez_id=84333 | |entrez_id=84333 | ||
|gc_percent=0.845771 | |gc_percent=0.845771 | ||
|gene_alias=RNF159 | |gene_alias=RNF159 | ||
|gene_description=polycomb group ring finger 5 | |gene_description=polycomb group ring finger 5 | ||
| − | |gene_name=PCGF5 | + | |gene_id=84333 |
| + | |gene_name=polycomb group ring finger 5 | ||
| + | |gene_source=HGNC:28264 | ||
| + | |gene_symbol=PCGF5 | ||
| + | |gene_synonyms=MGC16202 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:28264 | ||
|nearest_ensembl=ENSG00000180628 | |nearest_ensembl=ENSG00000180628 | ||
|nearest_promoter_id=NM_001257101 | |nearest_promoter_id=NM_001257101 | ||
|nearest_refseq=NM_032373 | |nearest_refseq=NM_032373 | ||
|nearest_unigene=Hs.500512 | |nearest_unigene=Hs.500512 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=91162960 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000614189.4 NM_001257101 NR_046435 uc001khh.5 BC007377 BC051845 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106206.1 | |tss_id=hg_106206.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q86SE9 | ||
}} | }} | ||
Revision as of 22:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000614189.4 NM_001257101 NR_046435 uc001khh.5 BC007377 BC051845 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000614189.4:0 NM_001257101:0 NR_046435:0 uc001khh.5:0 BC007377:0 BC051845:0 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001257101 |
| Entrez ID: | 84333 |
| Nearest Unigene: | Hs.500512 |
| Nearest Refseq: | NM_032373 |
| Nearest Ensembl: | ENSG00000180628 |
| Gene Name: | polycomb group ring finger 5 |
| Gene Alias: | RNF159 |
| Gene Description: | polycomb group ring finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.845771 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
