Difference between revisions of "TSS:Hg 106221.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=89 |entrez_id=143279 |gc_percent=0.79602 |gene_alias=- |gene_description=HECT domain E3 ubiquitin protein ligase 2 |gene_name=H...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000371681.8:0 ENST00000298068.9:0 uc001khk.4:0 uc001khl.4:0 AK295723:0 AK094625:0 BC040187:0 EU832472:16 EU832551:16 BC071762:-28 ENST00000446394.5:-40 NM_182765:-40 NM_001284274:-40 NM_173497:-40 NR_104291:-40 uc010qnm.3:-40 BX537856:98 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=0 | ||
|distance_to_tss=89 | |distance_to_tss=89 | ||
| + | |end=91410423 | ||
|entrez_id=143279 | |entrez_id=143279 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=HECT domain E3 ubiquitin protein ligase 2 | |gene_description=HECT domain E3 ubiquitin protein ligase 2 | ||
| − | |gene_name=HECTD2 | + | |gene_id=143279 |
| + | |gene_name=HECT domain E3 ubiquitin protein ligase 2 | ||
| + | |gene_source=HGNC:26736 | ||
| + | |gene_symbol=HECTD2 | ||
| + | |gene_synonyms=FLJ37306 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26736 | ||
|nearest_ensembl=ENSG00000165338 | |nearest_ensembl=ENSG00000165338 | ||
|nearest_promoter_id=NM_182765 | |nearest_promoter_id=NM_182765 | ||
|nearest_refseq=NM_173497 | |nearest_refseq=NM_173497 | ||
|nearest_unigene=Hs.596096 | |nearest_unigene=Hs.596096 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=91410324 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000371681.8 ENST00000298068.9 uc001khk.4 uc001khl.4 AK295723 AK094625 BC040187 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106221.1 | |tss_id=hg_106221.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DIQ2 Q5U5R9 | ||
}} | }} | ||
Revision as of 22:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371681.8 ENST00000298068.9 uc001khk.4 uc001khl.4 AK295723 AK094625 BC040187 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000371681.8:0 ENST00000298068.9:0 uc001khk.4:0 uc001khl.4:0 AK295723:0 AK094625:0 BC040187:0 EU832472:16 EU832551:16 BC071762:-28 ENST00000446394.5:-40 NM_182765:-40 NM_001284274:-40 NM_173497:-40 NR_104291:-40 uc010qnm.3:-40 BX537856:98 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NM_182765 |
| Entrez ID: | 143279 |
| Nearest Unigene: | Hs.596096 |
| Nearest Refseq: | NM_173497 |
| Nearest Ensembl: | ENSG00000165338 |
| Gene Name: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Alias: | - |
| Gene Description: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
