Difference between revisions of "TSS:Hg 1065.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-24952 |entrez_id=832 |gc_percent=0.402985 |gene_alias=CAPB|CAPPB|CAPZ |gene_description=capping actin protein of muscle Z-line...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CAPPB= | ||
| + | |CAPZ= | ||
| + | |all_trans=ENST00000364739.1:0 uc057cwy.1:0 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=-24952 | |distance_to_tss=-24952 | ||
| + | |end=19510594 | ||
|entrez_id=832 | |entrez_id=832 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=CAPB|CAPPB|CAPZ | |gene_alias=CAPB|CAPPB|CAPZ | ||
|gene_description=capping actin protein of muscle Z-line beta subunit | |gene_description=capping actin protein of muscle Z-line beta subunit | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name="RNA, U4 small nuclear 28, pseudogene" | ||
| + | |gene_source=HGNC:46964 | ||
| + | |gene_symbol=RNU4-28P | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:46964 | ||
|nearest_ensembl=ENSG00000077549 | |nearest_ensembl=ENSG00000077549 | ||
|nearest_promoter_id=NM_004930 | |nearest_promoter_id=NM_004930 | ||
|nearest_refseq=NM_004930 | |nearest_refseq=NM_004930 | ||
|nearest_unigene=Hs.432760 | |nearest_unigene=Hs.432760 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=19510592 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000364739.1 uc057cwy.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_1065.1 | |tss_id=hg_1065.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:21, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000364739.1 uc057cwy.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000364739.1:0 uc057cwy.1:0 |
TATA-Box annotation
| Distance to TSS: | -24952 |
|---|---|
| Nearest PromoterID: | NM_004930 |
| Entrez ID: | 832 |
| Nearest Unigene: | Hs.432760 |
| Nearest Refseq: | NM_004930 |
| Nearest Ensembl: | ENSG00000077549 |
| Gene Name: | "RNA, U4 small nuclear 28, pseudogene" |
| Gene Alias: | CAPB |
| Gene Description: | capping actin protein of muscle Z-line beta subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
