Difference between revisions of "TSS:Hg 106662.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=97 |entrez_id=8945 |gc_percent=0.681592 |gene_alias=BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP |gene_description=b...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FBW1A= | ||
| + | |FBXW1= | ||
| + | |FBXW1A= | ||
| + | |FWD1= | ||
| + | |all_trans=ENST00000408038.6:0 uc001ktb.5:0 CR749295:0 AF129530:0 Y14153:0 BC027994:0 GU727631:0 AK313353:0 AY207475:0 AY207476:0 AK295870:0 CU693362:5 AB587367:5 JF432214:5 AF101784:5 KJ892659:5 KU178451:5 KU178452:5 KU178453:5 KU178454:5 ENST00000465182.1:6 uc057vmz.1:6 AK313417:-14 ENST00000475200.5:-15 uc057vmy.1:-15 ENST00000370187.7:-21 uc001kta.5:-21 ENST00000393441.8:-51 NM_001256856:-51 NM_003939:-51 NM_033637:-51 uc001ktc.5:-51 ENST00000370183.2:358 uc057vna.1:358 | ||
| + | |bTrCP= | ||
| + | |bTrCP1= | ||
| + | |betaTrCP= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=97 | |distance_to_tss=97 | ||
| + | |end=101354176 | ||
|entrez_id=8945 | |entrez_id=8945 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP | |gene_alias=BETA-TRCP|FBW1A|FBXW1|FBXW1A|FWD1|bTrCP|bTrCP1|betaTrCP | ||
|gene_description=beta-transducin repeat containing E3 ubiquitin protein ligase | |gene_description=beta-transducin repeat containing E3 ubiquitin protein ligase | ||
| − | |gene_name=BTRC | + | |gene_id=8945 |
| + | |gene_name=beta-transducin repeat containing E3 ubiquitin protein ligase | ||
| + | |gene_source=HGNC:1144 | ||
| + | |gene_symbol=BTRC | ||
| + | |gene_synonyms=FBXW1A Fwd1 bTrCP bTrCP1 beta-TrCP1 betaTrCP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1144 | ||
|nearest_ensembl=ENSG00000166167 | |nearest_ensembl=ENSG00000166167 | ||
|nearest_promoter_id=NM_033637 | |nearest_promoter_id=NM_033637 | ||
|nearest_refseq=NM_003939 | |nearest_refseq=NM_003939 | ||
|nearest_unigene=Hs.643802 | |nearest_unigene=Hs.643802 | ||
| + | |num_trans=34 | ||
| + | |species=human | ||
| + | |start=101354083 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000408038.6 uc001ktb.5 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106662.1 | |tss_id=hg_106662.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q68DS0 Q86WI4 Q86WI5 Q9Y297 | ||
}} | }} | ||
Revision as of 22:28, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000408038.6 uc001ktb.5 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 |
|---|---|
| Distance: | 0 |
| Num_trans: | 34 |
| All_trans: | ENST00000408038.6:0 uc001ktb.5:0 CR749295:0 AF129530:0 Y14153:0 BC027994:0 GU727631:0 AK313353:0 AY207475:0 AY207476:0 AK295870:0 CU693362:5 AB587367:5 JF432214:5 AF101784:5 KJ892659:5 KU178451:5 KU178452:5 KU178453:5 KU178454:5 ENST00000465182.1:6 uc057vmz.1:6 AK313417:-14 ENST00000475200.5:-15 uc057vmy.1:-15 ENST00000370187.7:-21 uc001kta.5:-21 ENST00000393441.8:-51 NM_001256856:-51 NM_003939:-51 NM_033637:-51 uc001ktc.5:-51 ENST00000370183.2:358 uc057vna.1:358 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_033637 |
| Entrez ID: | 8945 |
| Nearest Unigene: | Hs.643802 |
| Nearest Refseq: | NM_003939 |
| Nearest Ensembl: | ENSG00000166167 |
| Gene Name: | beta-transducin repeat containing E3 ubiquitin protein ligase |
| Gene Alias: | BETA-TRCP |
| Gene Description: | beta-transducin repeat containing E3 ubiquitin protein ligase |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
