Difference between revisions of "TSS:Hg 106680.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=88 |entrez_id=79803 |gc_percent=0.741294 |gene_alias=BLOC2S3 |gene_description="HPS6, biogenesis of lysosomal organelles comple...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=KJ894735:0 AF536238:-32 BC011594:-32 ENST00000299238.6:-44 uc001kuj.4:-44 BC014993:-44 NM_024747:-67 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=88 | |distance_to_tss=88 | ||
| + | |end=102065476 | ||
|entrez_id=79803 | |entrez_id=79803 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_024747 | |nearest_refseq=NM_024747 | ||
|nearest_unigene=Hs.125133 | |nearest_unigene=Hs.125133 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=102065433 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ894735 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106680.1 | |tss_id=hg_106680.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ894735 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | KJ894735:0 AF536238:-32 BC011594:-32 ENST00000299238.6:-44 uc001kuj.4:-44 BC014993:-44 NM_024747:-67 |
TATA-Box annotation
| Distance to TSS: | 88 |
|---|---|
| Nearest PromoterID: | NM_024747 |
| Entrez ID: | 79803 |
| Nearest Unigene: | Hs.125133 |
| Nearest Refseq: | NM_024747 |
| Nearest Ensembl: | ENSG00000166189 |
| Gene Name: | HPS6 |
| Gene Alias: | BLOC2S3 |
| Gene Description: | "HPS6, biogenesis of lysosomal organelles complex 2 subunit 3" |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
