Difference between revisions of "TSS:Hg 107370.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=42 |entrez_id=196051 |gc_percent=0.810945 |gene_alias=DPPL2|PPAPDC1|PPAPDC1A |gene_description=phospholipid phosphatase 4 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PPAPDC1= | ||
| + | |PPAPDC1A= | ||
| + | |all_trans=ENST00000398250.5:-40 NM_001318166:-40 NM_001318167:-40 NM_001318168:-40 NM_001318169:-40 NM_001030059:-40 NR_134516:-40 uc001lev.1:-40 BC101267:73 BC101269:73 BC122535:73 BC101268:73 BC132787:133 ENST00000427079.5:224 uc057wjl.1:224 AK296273:249 HQ258170:303 KJ895775:303 KJ903972:303 AK310178:305 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=-40 | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
| + | |end=120456998 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=DPPL2|PPAPDC1|PPAPDC1A | |gene_alias=DPPL2|PPAPDC1|PPAPDC1A | ||
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_name=PLPP4 | + | |gene_id=196051 |
| + | |gene_name=phospholipid phosphatase 4 | ||
| + | |gene_source=HGNC:23531 | ||
| + | |gene_symbol=PLPP4 | ||
| + | |gene_synonyms=DPPL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
|nearest_promoter_id=NM_001318169 | |nearest_promoter_id=NM_001318169 | ||
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=120456993 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000398250.5 NM_001318166 NM_001318167 NM_001318168 NM_001318169 NM_001030059 NR_134516 uc001lev.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107370.1 | |tss_id=hg_107370.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VZY2 | ||
}} | }} | ||
Revision as of 22:58, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000398250.5 NM_001318166 NM_001318167 NM_001318168 NM_001318169 NM_001030059 NR_134516 uc001lev.1 |
|---|---|
| Distance: | -40 |
| Num_trans: | 20 |
| All_trans: | ENST00000398250.5:-40 NM_001318166:-40 NM_001318167:-40 NM_001318168:-40 NM_001318169:-40 NM_001030059:-40 NR_134516:-40 uc001lev.1:-40 BC101267:73 BC101269:73 BC122535:73 BC101268:73 BC132787:133 ENST00000427079.5:224 uc057wjl.1:224 AK296273:249 HQ258170:303 KJ895775:303 KJ903972:303 AK310178:305 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_001318169 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2 |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
