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Difference between revisions of "TSS:Hg 107392.1"

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(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=-115 |entrez_id=11101 |gc_percent=0.666667 |gene_alias=- |gene_description=arginyltransferase 1 |gene_name=ATE1 |gene_type=prote...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|all_trans=ENST00000437593.1:101 NR_120495:101 uc057wlx.1:101
 +
|chr=chr10
 
|cpg_percent=0.09
 
|cpg_percent=0.09
 +
|distance=101
 
|distance_to_tss=-115
 
|distance_to_tss=-115
 +
|end=121928211
 
|entrez_id=11101
 
|entrez_id=11101
 
|gc_percent=0.666667
 
|gc_percent=0.666667
 
|gene_alias=-
 
|gene_alias=-
 
|gene_description=arginyltransferase 1
 
|gene_description=arginyltransferase 1
|gene_name=ATE1
+
|gene_id=100130887
 +
|gene_name=ATE1 antisense RNA 1
 +
|gene_source=HGNC:49496
 +
|gene_symbol=ATE1-AS1
 +
|gene_synonyms=ENST00000437593
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:49496
 
|nearest_ensembl=ENSG00000107669
 
|nearest_ensembl=ENSG00000107669
 
|nearest_promoter_id=NM_001288735
 
|nearest_promoter_id=NM_001288735
 
|nearest_refseq=NM_007041
 
|nearest_refseq=NM_007041
 
|nearest_unigene=Hs.632080
 
|nearest_unigene=Hs.632080
 +
|num_trans=3
 +
|species=human
 +
|start=121928144
 +
|strand=+
 +
|transcript_name=ENST00000437593.1 NR_120495 uc057wlx.1
 +
|tss_classification=yes
 
|tss_id=hg_107392.1
 
|tss_id=hg_107392.1
 +
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Revision as of 22:59, 8 March 2018

Basic information about the TSS


TSS ID:hg_107392.1
Species:human
Chr:chr10
TSS Classification:yes
Start:121928144
End:121928211
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000437593.1 NR_120495 uc057wlx.1
Distance:101
GeneID:100130887
HGNC/MGI_ID:HGNC:49496
UniProt_ID:
Gene_name:ATE1 antisense RNA 1
Gene_symbol:ATE1-AS1
Gene_synonyms:ENST00000437593
Gene_source:HGNC:49496



Transcript annotation


Transcript_name:ENST00000437593.1 NR_120495 uc057wlx.1
Distance:101
Num_trans:3
All_trans:ENST00000437593.1:101 NR_120495:101 uc057wlx.1:101



TATA-Box annotation


Distance to TSS:-115
Nearest PromoterID:NM_001288735
Entrez ID:11101
Nearest Unigene:Hs.632080
Nearest Refseq:NM_007041
Nearest Ensembl:ENSG00000107669
Gene Name:ATE1 antisense RNA 1
Gene Alias:-
Gene Description:arginyltransferase 1
Gene Type:protein-coding
CpG%:0.09
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):