Difference between revisions of "TSS:Hg 107417.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=-26 |entrez_id=10579 |gc_percent=0.726368 |gene_alias=AZU-1|ECTACC |gene_description=transforming acidic coiled-coil containing...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ECTACC= | ||
| + | |all_trans=ENST00000493951.5:0 ENST00000369001.5:0 ENST00000492237.5:0 NM_001291879:0 uc057wms.1:0 uc001lfx.3:0 uc057wmt.1:0 BC015736:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=-26 | |distance_to_tss=-26 | ||
| + | |end=122113058 | ||
|entrez_id=10579 | |entrez_id=10579 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=AZU-1|ECTACC | |gene_alias=AZU-1|ECTACC | ||
|gene_description=transforming acidic coiled-coil containing protein 2 | |gene_description=transforming acidic coiled-coil containing protein 2 | ||
| − | |gene_name=TACC2 | + | |gene_id=10579 |
| + | |gene_name=transforming acidic coiled-coil containing protein 2 | ||
| + | |gene_source=HGNC:11523 | ||
| + | |gene_symbol=TACC2 | ||
| + | |gene_synonyms=AZU-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11523 | ||
|nearest_ensembl=ENSG00000138162 | |nearest_ensembl=ENSG00000138162 | ||
|nearest_promoter_id=NM_001291879 | |nearest_promoter_id=NM_001291879 | ||
|nearest_refseq=NM_006997 | |nearest_refseq=NM_006997 | ||
|nearest_unigene=Hs.501252 | |nearest_unigene=Hs.501252 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=122112968 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000493951.5 ENST00000369001.5 ENST00000492237.5 NM_001291879 uc057wms.1 uc001lfx.3 uc057wmt.1 BC015736 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107417.1 | |tss_id=hg_107417.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q4VXL4 | ||
}} | }} | ||
Revision as of 23:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000493951.5 ENST00000369001.5 ENST00000492237.5 NM_001291879 uc057wms.1 uc001lfx.3 uc057wmt.1 BC015736 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000493951.5:0 ENST00000369001.5:0 ENST00000492237.5:0 NM_001291879:0 uc057wms.1:0 uc001lfx.3:0 uc057wmt.1:0 BC015736:0 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_001291879 |
| Entrez ID: | 10579 |
| Nearest Unigene: | Hs.501252 |
| Nearest Refseq: | NM_006997 |
| Nearest Ensembl: | ENSG00000138162 |
| Gene Name: | transforming acidic coiled-coil containing protein 2 |
| Gene Alias: | AZU-1 |
| Gene Description: | transforming acidic coiled-coil containing protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
