Difference between revisions of "TSS:Hg 109507.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=3 |entrez_id=288 |gc_percent=0.517413 |gene_alias=ANKYRIN-G|MRT37 |gene_description=ankyrin 3 |gene_name=ANK3 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRT37= | ||
| + | |all_trans=ENST00000355288.6:0 NM_001149:0 uc001jkw.4:0 AK092527:0 AK292927:103 ENST00000618374.4:330 uc057tli.1:330 AL136710:330 ENST00000486349.2:490 uc057tmd.1:490 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=60141021 | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=ANKYRIN-G|MRT37 | |gene_alias=ANKYRIN-G|MRT37 | ||
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
| − | |gene_name=ANK3 | + | |gene_id=288 |
| + | |gene_name="ankyrin 3, node of Ranvier (ankyrin G)" | ||
| + | |gene_source=HGNC:494 | ||
| + | |gene_symbol=ANK3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:494 | ||
|nearest_ensembl=ENSG00000151150 | |nearest_ensembl=ENSG00000151150 | ||
|nearest_promoter_id=NM_001149 | |nearest_promoter_id=NM_001149 | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=60141004 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000355288.6 NM_001149 uc001jkw.4 AK092527 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_109507.1 | |tss_id=hg_109507.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q12955 Q8NAK2 | ||
}} | }} | ||
Revision as of 00:30, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000355288.6 NM_001149 uc001jkw.4 AK092527 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000355288.6:0 NM_001149:0 uc001jkw.4:0 AK092527:0 AK292927:103 ENST00000618374.4:330 uc057tli.1:330 AL136710:330 ENST00000486349.2:490 uc057tmd.1:490 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001149 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | "ankyrin 3, node of Ranvier (ankyrin G)" |
| Gene Alias: | ANKYRIN-G |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
