Difference between revisions of "TSS:Hg 109554.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.09 |distance_to_tss=117 |entrez_id=288 |gc_percent=0.681592 |gene_alias=ANKYRIN-G|MRT37 |gene_description=ankyrin 3 |gene_name=ANK3 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRT37= | ||
| + | |all_trans=BX537917:1 ENST00000373827.6:-70 uc001jkz.5:-70 BX648574:-70 ENST00000510382.1:74 uc057tmh.1:74 AK172736:74 EU832293:78 EU832377:78 NM_001204403:-106 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| + | |distance=1 | ||
|distance_to_tss=117 | |distance_to_tss=117 | ||
| + | |end=60733420 | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=ANKYRIN-G|MRT37 | |gene_alias=ANKYRIN-G|MRT37 | ||
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
| − | |gene_name=ANK3 | + | |gene_id=288 |
| + | |gene_name="ankyrin 3, node of Ranvier (ankyrin G)" | ||
| + | |gene_source=HGNC:494 | ||
| + | |gene_symbol=ANK3 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:494 | ||
|nearest_ensembl=ENSG00000151150 | |nearest_ensembl=ENSG00000151150 | ||
|nearest_promoter_id=NM_001204403 | |nearest_promoter_id=NM_001204403 | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=60733397 | ||
| + | |strand=- | ||
| + | |transcript_name=BX537917 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_109554.1 | |tss_id=hg_109554.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 00:32, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BX537917 |
|---|---|
| Distance: | 1 |
| Num_trans: | 10 |
| All_trans: | BX537917:1 ENST00000373827.6:-70 uc001jkz.5:-70 BX648574:-70 ENST00000510382.1:74 uc057tmh.1:74 AK172736:74 EU832293:78 EU832377:78 NM_001204403:-106 |
TATA-Box annotation
| Distance to TSS: | 117 |
|---|---|
| Nearest PromoterID: | NM_001204403 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | "ankyrin 3, node of Ranvier (ankyrin G)" |
| Gene Alias: | ANKYRIN-G |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
