Difference between revisions of "TSS:Hg 111738.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=112 |entrez_id=2263 |gc_percent=0.820896 |gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BEK= | ||
| + | |BFR-1= | ||
| + | |CD332= | ||
| + | |CEK3= | ||
| + | |CFD1= | ||
| + | |ECT1= | ||
| + | |JWS= | ||
| + | |K-SAM= | ||
| + | |KGFR= | ||
| + | |TK14= | ||
| + | |TK25= | ||
| + | |all_trans=ENST00000369060.8:43 ENST00000359354.6:43 uc010qtl.3:43 uc057wll.1:43 M87771:43 ENST00000336553.10:-45 uc057wli.1:-45 M35718:-47 ENST00000457416.6:-52 uc057wle.1:-52 M97193:-52 BC096749:-59 ENST00000604236.5:-62 uc057wky.1:-62 ENST00000360144.7:-81 uc057wlf.1:-81 AK026508:-81 ENST00000369059.5:-101 uc057wkz.1:-101 ENST00000613048.4:-107 ENST00000356226.8:-107 ENST00000369058.7:107 NR_073009:-107 NM_000141:-107 NM_001144918:-107 NM_001144917:-107 NM_022970:-107 NM_001320658:-107 NM_001144919:-107 uc057wkv.1:-107 uc010qtm.3:-107 uc057wlh.1:107 AB030073:107 BC039243:-107 M80634:107 AB030075:107 AB030074:107 AB030076:107 AB030077:107 AB030078:107 M87772:255 ENST00000358487.9:257 uc057wkw.1:257 M87770:257 ENST00000490349.5:269 uc057wlk.1:269 U11814:269 X52832:351 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=43 | ||
|distance_to_tss=112 | |distance_to_tss=112 | ||
| + | |end=121598351 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
|gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 | |gene_alias=BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 | ||
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
| − | |gene_name=FGFR2 | + | |gene_id=2263 |
| + | |gene_name=fibroblast growth factor receptor 2 | ||
| + | |gene_source=HGNC:3689 | ||
| + | |gene_symbol=FGFR2 | ||
| + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
|nearest_promoter_id=NM_022970 | |nearest_promoter_id=NM_022970 | ||
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| + | |num_trans=48 | ||
| + | |species=human | ||
| + | |start=121598340 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000369060.8 ENST00000359354.6 uc010qtl.3 uc057wll.1 M87771 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111738.1 | |tss_id=hg_111738.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P21802 | ||
}} | }} | ||
Revision as of 02:05, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000369060.8 ENST00000359354.6 uc010qtl.3 uc057wll.1 M87771 |
|---|---|
| Distance: | 43 |
| Num_trans: | 48 |
| All_trans: | ENST00000369060.8:43 ENST00000359354.6:43 uc010qtl.3:43 uc057wll.1:43 M87771:43 ENST00000336553.10:-45 uc057wli.1:-45 M35718:-47 ENST00000457416.6:-52 uc057wle.1:-52 M97193:-52 BC096749:-59 ENST00000604236.5:-62 uc057wky.1:-62 ENST00000360144.7:-81 uc057wlf.1:-81 AK026508:-81 ENST00000369059.5:-101 uc057wkz.1:-101 ENST00000613048.4:-107 ENST00000356226.8:-107 ENST00000369058.7:107 NR_073009:-107 NM_000141:-107 NM_001144918:-107 NM_001144917:-107 NM_022970:-107 NM_001320658:-107 NM_001144919:-107 uc057wkv.1:-107 uc010qtm.3:-107 uc057wlh.1:107 AB030073:107 BC039243:-107 M80634:107 AB030075:107 AB030074:107 AB030076:107 AB030077:107 AB030078:107 M87772:255 ENST00000358487.9:257 uc057wkw.1:257 M87770:257 ENST00000490349.5:269 uc057wlk.1:269 U11814:269 X52832:351 |
TATA-Box annotation
| Distance to TSS: | 112 |
|---|---|
| Nearest PromoterID: | NM_022970 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
