Difference between revisions of "TSS:Hg 111976.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-149020 |entrez_id=118611 |gc_percent=0.432836 |gene_alias=FATS|bA422P15.2 |gene_description=chromosome 10 open reading frame 9...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000488181.1:13 uc057wtu.1:13 AK309217:38 AK297577:-47 | ||
| + | |bA422P15.2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=13 | ||
|distance_to_tss=-149020 | |distance_to_tss=-149020 | ||
| + | |end=126670463 | ||
|entrez_id=118611 | |entrez_id=118611 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=FATS|bA422P15.2 | |gene_alias=FATS|bA422P15.2 | ||
|gene_description=chromosome 10 open reading frame 90 | |gene_description=chromosome 10 open reading frame 90 | ||
| − | |gene_name=C10orf90 | + | |gene_id=118611 |
| + | |gene_name=chromosome 10 open reading frame 90 | ||
| + | |gene_source=HGNC:26563 | ||
| + | |gene_symbol=C10orf90 | ||
| + | |gene_synonyms=FATS FLJ32938 bA422P15.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26563 | ||
|nearest_ensembl=ENSG00000154493 | |nearest_ensembl=ENSG00000154493 | ||
|nearest_promoter_id=NM_001004298 | |nearest_promoter_id=NM_001004298 | ||
|nearest_refseq=NM_001004298 | |nearest_refseq=NM_001004298 | ||
|nearest_unigene=Hs.587663 | |nearest_unigene=Hs.587663 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=126670458 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000488181.1 uc057wtu.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111976.1 | |tss_id=hg_111976.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=S4R3N7 | ||
}} | }} | ||
Revision as of 02:15, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000488181.1 uc057wtu.1 |
|---|---|
| Distance: | 13 |
| Num_trans: | 4 |
| All_trans: | ENST00000488181.1:13 uc057wtu.1:13 AK309217:38 AK297577:-47 |
TATA-Box annotation
| Distance to TSS: | -149020 |
|---|---|
| Nearest PromoterID: | NM_001004298 |
| Entrez ID: | 118611 |
| Nearest Unigene: | Hs.587663 |
| Nearest Refseq: | NM_001004298 |
| Nearest Ensembl: | ENSG00000154493 |
| Gene Name: | chromosome 10 open reading frame 90 |
| Gene Alias: | FATS |
| Gene Description: | chromosome 10 open reading frame 90 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
