Difference between revisions of "TSS:Hg 113066.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=77 |entrez_id=100129827 |gc_percent=0.691542 |gene_alias=- |gene_description=MRVI1 antisense RNA 1 |gene_name=MRVI1-AS1 |gene_ty...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000529979.5:-10 uc031pza.2:-10 ENST00000529829.5:-35 uc001miu.5:-35 BC028123:-35 NR_046374:-71 NR_034094:-71 NR_034093:-71 NR_046375:-71 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=-10 | ||
|distance_to_tss=77 | |distance_to_tss=77 | ||
| + | |end=10541319 | ||
|entrez_id=100129827 | |entrez_id=100129827 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=MRVI1 antisense RNA 1 | |gene_description=MRVI1 antisense RNA 1 | ||
| − | |gene_name=MRVI1-AS1 | + | |gene_id=100129827 |
| + | |gene_name=MRVI1 antisense RNA 1 | ||
| + | |gene_source=HGNC:43434 | ||
| + | |gene_symbol=MRVI1-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:43434 | ||
|nearest_ensembl=ENSG00000177112 | |nearest_ensembl=ENSG00000177112 | ||
|nearest_promoter_id=NR_034093 | |nearest_promoter_id=NR_034093 | ||
|nearest_refseq=NR_034093 | |nearest_refseq=NR_034093 | ||
|nearest_unigene=Hs.246769 | |nearest_unigene=Hs.246769 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=10541306 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000529979.5 uc031pza.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_113066.1 | |tss_id=hg_113066.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 03:02, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000529979.5 uc031pza.2 |
|---|---|
| Distance: | -10 |
| Num_trans: | 9 |
| All_trans: | ENST00000529979.5:-10 uc031pza.2:-10 ENST00000529829.5:-35 uc001miu.5:-35 BC028123:-35 NR_046374:-71 NR_034094:-71 NR_034093:-71 NR_046375:-71 |
TATA-Box annotation
| Distance to TSS: | 77 |
|---|---|
| Nearest PromoterID: | NR_034093 |
| Entrez ID: | 100129827 |
| Nearest Unigene: | Hs.246769 |
| Nearest Refseq: | NR_034093 |
| Nearest Ensembl: | ENSG00000177112 |
| Gene Name: | MRVI1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | MRVI1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
