Difference between revisions of "TSS:Hg 116168.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |GPCIII= | ||
| + | |NAADALASE2= | ||
| + | |NAALADASE2= | ||
| + | |all_trans=ENST00000529090.5:0 ENST00000524501.1:0 NM_005467:0 NM_001300930:0 uc058gjy.1:0 uc058gjz.1:0 BC038840:0 AK075390:0 BC027594:0 ENST00000321955.8:3 uc009yvx.4:3 BC088727:3 AJ012370:5 ENST00000525171.5:20 uc001pde.4:20 BC067793:20 ENST00000527493.5:-21 uc058gjx.1:-21 ENST00000375944.7:29 uc009yvy.4:29 BC099646:29 BC096316:29 BC096317:29 BC096318:29 KJ902050:44 CU691606:49 ENST00000534061.5:-107 uc001pdf.5:-107 ENST00000526637.1:355 uc058gka.1:355 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=90134709 | ||
|entrez_id=10003 | |entrez_id=10003 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=GCPIII|GPCIII|NAADALASE2|NAALADASE2 | |gene_alias=GCPIII|GPCIII|NAADALASE2|NAALADASE2 | ||
|gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | |gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | ||
| − | |gene_name=NAALAD2 | + | |gene_id=10003 |
| + | |gene_name=N-acetylated alpha-linked acidic dipeptidase 2 | ||
| + | |gene_source=HGNC:14526 | ||
| + | |gene_symbol=NAALAD2 | ||
| + | |gene_synonyms=GPCIII NAADALASE2 NAALADASE2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14526 | ||
|nearest_ensembl=ENSG00000077616 | |nearest_ensembl=ENSG00000077616 | ||
|nearest_promoter_id=NM_005467 | |nearest_promoter_id=NM_005467 | ||
|nearest_refseq=NM_005467 | |nearest_refseq=NM_005467 | ||
|nearest_unigene=Hs.112482 | |nearest_unigene=Hs.112482 | ||
| + | |num_trans=30 | ||
| + | |species=human | ||
| + | |start=90134635 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000529090.5 ENST00000524501.1 NM_005467 NM_001300930 uc058gjy.1 uc058gjz.1 BC038840 AK075390 BC027594 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_116168.1 | |tss_id=hg_116168.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q4G181 Q8IUX3 Q9Y3Q0 | ||
}} | }} | ||
Revision as of 05:14, 9 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000529090.5 ENST00000524501.1 NM_005467 NM_001300930 uc058gjy.1 uc058gjz.1 BC038840 AK075390 BC027594 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENST00000529090.5:0 ENST00000524501.1:0 NM_005467:0 NM_001300930:0 uc058gjy.1:0 uc058gjz.1:0 BC038840:0 AK075390:0 BC027594:0 ENST00000321955.8:3 uc009yvx.4:3 BC088727:3 AJ012370:5 ENST00000525171.5:20 uc001pde.4:20 BC067793:20 ENST00000527493.5:-21 uc058gjx.1:-21 ENST00000375944.7:29 uc009yvy.4:29 BC099646:29 BC096316:29 BC096317:29 BC096318:29 KJ902050:44 CU691606:49 ENST00000534061.5:-107 uc001pdf.5:-107 ENST00000526637.1:355 uc058gka.1:355 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_005467 |
| Entrez ID: | 10003 |
| Nearest Unigene: | Hs.112482 |
| Nearest Refseq: | NM_005467 |
| Nearest Ensembl: | ENSG00000077616 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Alias: | GCPIII |
| Gene Description: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
