Difference between revisions of "TSS:Hg 116169.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=124 |entrez_id=10003 |gc_percent=0.59204 |gene_alias=GCPIII|GPCIII|NAADALASE2|NAALADASE2 |gene_description=N-acetylated alpha-li...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GPCIII= | ||
| + | |NAADALASE2= | ||
| + | |NAALADASE2= | ||
| + | |all_trans=CU691606:-14 KJ902050:-19 ENST00000375944.7:-34 uc009yvy.4:-34 BC099646:-34 BC096316:-34 BC096317:-34 BC096318:-34 ENST00000525171.5:-43 uc001pde.4:-43 BC067793:-43 AJ012370:-58 ENST00000321955.8:-60 uc009yvx.4:-60 BC088727:-60 ENST00000524501.1:-77 uc058gjz.1:-77 BC027594:-77 AK075390:-97 ENST00000529090.5:-108 uc058gjy.1:-108 BC038840:-108 NM_005467:-122 NM_001300930:-122 ENST00000527493.5:-157 uc058gjx.1:-157 ENST00000534061.5:-243 uc001pdf.5:-243 ENST00000526637.1:287 uc058gka.1:287 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=-14 | ||
|distance_to_tss=124 | |distance_to_tss=124 | ||
| + | |end=90134777 | ||
|entrez_id=10003 | |entrez_id=10003 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=GCPIII|GPCIII|NAADALASE2|NAALADASE2 | |gene_alias=GCPIII|GPCIII|NAADALASE2|NAALADASE2 | ||
|gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | |gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | ||
| − | |gene_name=NAALAD2 | + | |gene_id=10003 |
| + | |gene_name=N-acetylated alpha-linked acidic dipeptidase 2 | ||
| + | |gene_source=HGNC:14526 | ||
| + | |gene_symbol=NAALAD2 | ||
| + | |gene_synonyms=GPCIII NAADALASE2 NAALADASE2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14526 | ||
|nearest_ensembl=ENSG00000077616 | |nearest_ensembl=ENSG00000077616 | ||
|nearest_promoter_id=NM_005467 | |nearest_promoter_id=NM_005467 | ||
|nearest_refseq=NM_005467 | |nearest_refseq=NM_005467 | ||
|nearest_unigene=Hs.112482 | |nearest_unigene=Hs.112482 | ||
| + | |num_trans=30 | ||
| + | |species=human | ||
| + | |start=90134771 | ||
| + | |strand=+ | ||
| + | |transcript_name=CU691606 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_116169.1 | |tss_id=hg_116169.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 05:14, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CU691606 |
|---|---|
| Distance: | -14 |
| Num_trans: | 30 |
| All_trans: | CU691606:-14 KJ902050:-19 ENST00000375944.7:-34 uc009yvy.4:-34 BC099646:-34 BC096316:-34 BC096317:-34 BC096318:-34 ENST00000525171.5:-43 uc001pde.4:-43 BC067793:-43 AJ012370:-58 ENST00000321955.8:-60 uc009yvx.4:-60 BC088727:-60 ENST00000524501.1:-77 uc058gjz.1:-77 BC027594:-77 AK075390:-97 ENST00000529090.5:-108 uc058gjy.1:-108 BC038840:-108 NM_005467:-122 NM_001300930:-122 ENST00000527493.5:-157 uc058gjx.1:-157 ENST00000534061.5:-243 uc001pdf.5:-243 ENST00000526637.1:287 uc058gka.1:287 |
TATA-Box annotation
| Distance to TSS: | 124 |
|---|---|
| Nearest PromoterID: | NM_005467 |
| Entrez ID: | 10003 |
| Nearest Unigene: | Hs.112482 |
| Nearest Refseq: | NM_005467 |
| Nearest Ensembl: | ENSG00000077616 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Alias: | GCPIII |
| Gene Description: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
