Difference between revisions of "TSS:Hg 118491.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=1043 |entrez_id=7275 |gc_percent=0.616915 |gene_alias=RDOB|rd5 |gene_description=tubby bipartite transcription factor |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK126895:0 ENST00000528151.1:-5 uc057yrd.1:-5 ENST00000526646.1:-24 uc057yrc.1:-24 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=1043 | |distance_to_tss=1043 | ||
| + | |end=8039694 | ||
|entrez_id=7275 | |entrez_id=7275 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=RDOB|rd5 | |gene_alias=RDOB|rd5 | ||
|gene_description=tubby bipartite transcription factor | |gene_description=tubby bipartite transcription factor | ||
| − | |gene_name= | + | |gene_id=100129111 |
| + | |gene_name=uncharacterized LOC100129111 | ||
| + | |gene_source=EntrezGene:100129111 | ||
| + | |gene_symbol=LOC100129111 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000166402 | |nearest_ensembl=ENSG00000166402 | ||
|nearest_promoter_id=NM_003320 | |nearest_promoter_id=NM_003320 | ||
|nearest_refseq=NM_003320 | |nearest_refseq=NM_003320 | ||
|nearest_unigene=Hs.568986 | |nearest_unigene=Hs.568986 | ||
| + | |num_trans=5 | ||
| + | |rd5= | ||
| + | |species=human | ||
| + | |start=8039658 | ||
| + | |strand=- | ||
| + | |transcript_name=AK126895 | ||
| + | |tss_classification=no | ||
|tss_id=hg_118491.1 | |tss_id=hg_118491.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 06:53, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK126895 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | AK126895:0 ENST00000528151.1:-5 uc057yrd.1:-5 ENST00000526646.1:-24 uc057yrc.1:-24 |
TATA-Box annotation
| Distance to TSS: | 1043 |
|---|---|
| Nearest PromoterID: | NM_003320 |
| Entrez ID: | 7275 |
| Nearest Unigene: | Hs.568986 |
| Nearest Refseq: | NM_003320 |
| Nearest Ensembl: | ENSG00000166402 |
| Gene Name: | uncharacterized LOC100129111 |
| Gene Alias: | RDOB |
| Gene Description: | tubby bipartite transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
