Difference between revisions of "TSS:Hg 120054.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-53 |entrez_id=3995 |gc_percent=0.800995 |gene_alias=CYB5RP|LLCDL3 |gene_description=fatty acid desaturase 3 |gene_name=FADS3 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LLCDL3= | ||
| + | |all_trans=NM_021727:45 ENST00000278829.6:56 uc001nsm.5:56 BC004901:56 AF084560:76 ENST00000529525.1:83 uc058cfz.1:83 ENST00000414624.6:136 uc058cfx.1:136 AK310523:136 AK295473:137 AF134404:139 CU678796:207 DQ896129:208 KJ897134:208 DQ892880:208 AB529172:208 ENST00000525588.5:209 uc058cft.1:209 ENST00000527697.5:-444 uc058cfo.1:-444 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=45 | ||
|distance_to_tss=-53 | |distance_to_tss=-53 | ||
| + | |end=61891607 | ||
|entrez_id=3995 | |entrez_id=3995 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=CYB5RP|LLCDL3 | |gene_alias=CYB5RP|LLCDL3 | ||
|gene_description=fatty acid desaturase 3 | |gene_description=fatty acid desaturase 3 | ||
| − | |gene_name=FADS3 | + | |gene_id=3995 |
| + | |gene_name=fatty acid desaturase 3 | ||
| + | |gene_source=HGNC:3576 | ||
| + | |gene_symbol=FADS3 | ||
| + | |gene_synonyms=CYB5RP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3576 | ||
|nearest_ensembl=ENSG00000221968 | |nearest_ensembl=ENSG00000221968 | ||
|nearest_promoter_id=NM_021727 | |nearest_promoter_id=NM_021727 | ||
|nearest_refseq=NM_021727 | |nearest_refseq=NM_021727 | ||
|nearest_unigene=Hs.21765 | |nearest_unigene=Hs.21765 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=61891589 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_021727 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_120054.1 | |tss_id=hg_120054.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9Y5Q0 | ||
}} | }} | ||
Revision as of 08:00, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_021727 |
|---|---|
| Distance: | 45 |
| Num_trans: | 21 |
| All_trans: | NM_021727:45 ENST00000278829.6:56 uc001nsm.5:56 BC004901:56 AF084560:76 ENST00000529525.1:83 uc058cfz.1:83 ENST00000414624.6:136 uc058cfx.1:136 AK310523:136 AK295473:137 AF134404:139 CU678796:207 DQ896129:208 KJ897134:208 DQ892880:208 AB529172:208 ENST00000525588.5:209 uc058cft.1:209 ENST00000527697.5:-444 uc058cfo.1:-444 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_021727 |
| Entrez ID: | 3995 |
| Nearest Unigene: | Hs.21765 |
| Nearest Refseq: | NM_021727 |
| Nearest Ensembl: | ENSG00000221968 |
| Gene Name: | fatty acid desaturase 3 |
| Gene Alias: | CYB5RP |
| Gene Description: | fatty acid desaturase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
