Difference between revisions of "TSS:Hg 120524.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-6 |entrez_id=10004 |gc_percent=0.606965 |gene_alias=I100|NAALADASEL |gene_description=N-acetylated alpha-linked acidic dipepti...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NAALADASEL= | ||
| + | |all_trans=ENST00000358658.7:0 ENST00000339885.6:0 ENST00000529274.5:0 ENST00000528977.5:0 NM_005468:0 uc001ocn.4:0 uc058dcs.1:0 uc058dct.1:0 uc058dcu.1:0 AJ012371:0 BC143643:0 BC143644:0 ENST00000340252.8:7 ENST00000355721.7:7 ENST00000356632.7:7 uc058dcv.1:7 uc058dcw.1:7 uc058dcx.1:7 BC140321:7 AB527189:7 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=-6 | |distance_to_tss=-6 | ||
| + | |end=65058558 | ||
|entrez_id=10004 | |entrez_id=10004 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=I100|NAALADASEL | |gene_alias=I100|NAALADASEL | ||
|gene_description=N-acetylated alpha-linked acidic dipeptidase like 1 | |gene_description=N-acetylated alpha-linked acidic dipeptidase like 1 | ||
| − | |gene_name=NAALADL1 | + | |gene_id=10004 |
| + | |gene_name=N-acetylated alpha-linked acidic dipeptidase-like 1 | ||
| + | |gene_source=HGNC:23536 | ||
| + | |gene_symbol=NAALADL1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23536 | ||
|nearest_ensembl=ENSG00000168060 | |nearest_ensembl=ENSG00000168060 | ||
|nearest_promoter_id=NM_005468 | |nearest_promoter_id=NM_005468 | ||
|nearest_refseq=NM_005468 | |nearest_refseq=NM_005468 | ||
|nearest_unigene=Hs.13967 | |nearest_unigene=Hs.13967 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=65058527 | ||
| + | |strand=- | ||
|tata_box="-37(CCCTCTATAGGG,-,0.00)" | |tata_box="-37(CCCTCTATAGGG,-,0.00)" | ||
| + | |transcript_name=ENST00000358658.7 ENST00000339885.6 ENST00000529274.5 ENST00000528977.5 NM_005468 uc001ocn.4 uc058dcs.1 uc058dct.1 uc058dcu.1 AJ012371 BC143643 BC143644 | ||
| + | |tss_classification=no | ||
|tss_id=hg_120524.1 | |tss_id=hg_120524.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JX16 Q9UQQ1 | ||
}} | }} | ||
Revision as of 08:20, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000358658.7 ENST00000339885.6 ENST00000529274.5 ENST00000528977.5 NM_005468 uc001ocn.4 uc058dcs.1 uc058dct.1 uc058dcu.1 AJ012371 BC143643 BC143644 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000358658.7:0 ENST00000339885.6:0 ENST00000529274.5:0 ENST00000528977.5:0 NM_005468:0 uc001ocn.4:0 uc058dcs.1:0 uc058dct.1:0 uc058dcu.1:0 AJ012371:0 BC143643:0 BC143644:0 ENST00000340252.8:7 ENST00000355721.7:7 ENST00000356632.7:7 uc058dcv.1:7 uc058dcw.1:7 uc058dcx.1:7 BC140321:7 AB527189:7 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_005468 |
| Entrez ID: | 10004 |
| Nearest Unigene: | Hs.13967 |
| Nearest Refseq: | NM_005468 |
| Nearest Ensembl: | ENSG00000168060 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase-like 1 |
| Gene Alias: | I100 |
| Gene Description: | N-acetylated alpha-linked acidic dipeptidase like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-37(CCCTCTATAGGG,-,0.00)" |
