Difference between revisions of "TSS:Hg 87734.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000520970.5:0 uc064kyk.1:0 AB209590:0 ENST00000518913.5:35 ENST00000306349.12:35 uc003xbb.4:35 uc064kyl.1:35 BC002593:35 BC009305:35 BC032105:35 B...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PCOLC= | ||
| + | |PCP= | ||
| + | |PCP2= | ||
| + | |TLD= | ||
|all_trans=ENST00000520970.5:0 uc064kyk.1:0 AB209590:0 ENST00000518913.5:35 ENST00000306349.12:35 uc003xbb.4:35 uc064kyl.1:35 BC002593:35 BC009305:35 BC032105:35 BC044626:35 ENST00000397814.7:-47 ENST00000354870.5:-47 NM_001199:-47 NM_006129:-47 NR_033404:-47 NR_033403:-47 uc064kyi.1:-47 uc064kyj.1:-47 BC142953:59 AK291620:70 ENST00000520982.5:107 ENST00000520626.5:107 uc064kym.1:107 uc064kyn.1:107 BC136679:107 BC144365:107 BC144366:107 ENST00000518656.5:118 uc064kyo.1:118 BC101763:118 BC101765:118 BC143338:118 M22488:160 ENST00000483364.5:183 ENST00000471755.5:183 ENST00000521385.5:183 uc064kyp.1:183 uc064kyq.1:183 uc064kyr.1:183 Y08723:183 Y08724:183 Y08725:183 AB527418:188 KJ896503:188 U50330:189 ENST00000306385.9:-451 uc003xbg.5:-451 | |all_trans=ENST00000520970.5:0 uc064kyk.1:0 AB209590:0 ENST00000518913.5:35 ENST00000306349.12:35 uc003xbb.4:35 uc064kyl.1:35 BC002593:35 BC009305:35 BC032105:35 BC044626:35 ENST00000397814.7:-47 ENST00000354870.5:-47 NM_001199:-47 NM_006129:-47 NR_033404:-47 NR_033403:-47 uc064kyi.1:-47 uc064kyj.1:-47 BC142953:59 AK291620:70 ENST00000520982.5:107 ENST00000520626.5:107 uc064kym.1:107 uc064kyn.1:107 BC136679:107 BC144365:107 BC144366:107 ENST00000518656.5:118 uc064kyo.1:118 BC101763:118 BC101765:118 BC143338:118 M22488:160 ENST00000483364.5:183 ENST00000471755.5:183 ENST00000521385.5:183 uc064kyp.1:183 uc064kyq.1:183 uc064kyr.1:183 Y08723:183 Y08724:183 Y08725:183 AB527418:188 KJ896503:188 U50330:189 ENST00000306385.9:-451 uc003xbg.5:-451 | ||
|chr=chr8 | |chr=chr8 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=62 | |distance_to_tss=62 | ||
|end=22165217 | |end=22165217 | ||
| + | |end_of_center_position=22165202 | ||
|entrez_id=649 | |entrez_id=649 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=OI13 | + | |gene_alias=OI13 |
|gene_description=bone morphogenetic protein 1 | |gene_description=bone morphogenetic protein 1 | ||
|gene_id=649 | |gene_id=649 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=22165186 | |start=22165186 | ||
| + | |start_of_center_position=22165201 | ||
|strand=+ | |strand=+ | ||
|tata_box="-84(TTCCCTAAAAAG,-,0.00),-82(CCCTAAAAAGGG,+,0.00)" | |tata_box="-84(TTCCCTAAAAAG,-,0.00),-82(CCCTAAAAAGGG,+,0.00)" | ||
Revision as of 15:51, 10 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22165201 |
|---|---|
| End of the center position in the TSS region: | 22165202 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000520970.5 uc064kyk.1 AB209590 |
|---|---|
| Distance: | 0 |
| Num_trans: | 48 |
| All_trans: | ENST00000520970.5:0 uc064kyk.1:0 AB209590:0 ENST00000518913.5:35 ENST00000306349.12:35 uc003xbb.4:35 uc064kyl.1:35 BC002593:35 BC009305:35 BC032105:35 BC044626:35 ENST00000397814.7:-47 ENST00000354870.5:-47 NM_001199:-47 NM_006129:-47 NR_033404:-47 NR_033403:-47 uc064kyi.1:-47 uc064kyj.1:-47 BC142953:59 AK291620:70 ENST00000520982.5:107 ENST00000520626.5:107 uc064kym.1:107 uc064kyn.1:107 BC136679:107 BC144365:107 BC144366:107 ENST00000518656.5:118 uc064kyo.1:118 BC101763:118 BC101765:118 BC143338:118 M22488:160 ENST00000483364.5:183 ENST00000471755.5:183 ENST00000521385.5:183 uc064kyp.1:183 uc064kyq.1:183 uc064kyr.1:183 Y08723:183 Y08724:183 Y08725:183 AB527418:188 KJ896503:188 U50330:189 ENST00000306385.9:-451 uc003xbg.5:-451 |
TATA-Box annotation
| Distance to TSS: | 62 |
|---|---|
| Nearest PromoterID: | NR_033403 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | OI13 |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-84(TTCCCTAAAAAG,-,0.00),-82(CCCTAAAAAGGG,+,0.00)" |
